about
Protein flexibility in the light of structural alphabetsUbiquinone-binding site mutagenesis reveals the role of mitochondrial complex II in cell death initiationBordetella adenylate cyclase toxin is a unique ligand of the integrin complement receptor 3Loss of dispersion energy changes the stability and folding/unfolding equilibrium of the Trp-cage protein.Human interleukin-23 receptor antagonists derived from an albumin-binding domain scaffold inhibit IL-23-dependent ex vivo expansion of IL-17-producing T-cellsSpectral shifts and structures of phenol...Ar(n) clusters.Novel high-affinity binders of human interferon gamma derived from albumin-binding domain of protein G.Local dynamics of proteins and DNA evaluated from crystallographic B factorsMitochondrial targeting of vitamin E succinate enhances its pro-apoptotic and anti-cancer activity via mitochondrial complex IIAutomatic workflow for the classification of local DNA conformations.Block of NMDA receptor channels by endogenous neurosteroids: implications for the agonist induced conformational states of the channel vestibule.p19-targeted ABD-derived protein variants inhibit IL-23 binding and exert suppressive control over IL-23-stimulated expansion of primary human IL-17+ T-cells.WatAA: Atlas of Protein Hydration. Exploring synergies between data mining and ab initio calculations.Design of composite inhibitors targeting glutamate carboxypeptidase II: the importance of effector functionalitiesNon-covalent interactions in biomacromolecules.DNATCO: assignment of DNA conformers at dnatco.org.Selective Disruption of Respiratory Supercomplexes as a New Strategy to Suppress Her2high Breast Cancer.Bioinformatic analysis of the protein/DNA interface.Density-functional, density-functional tight-binding, and wave function calculations on biomolecular systems.Mitochondrial Targeting of Metformin Enhances Its Activity against Pancreatic Cancer.Affinity of vitamin E analogues for the ubiquinone complex II site correlates with their toxicity to cancer cells.On the Structure and Geometry of Biomolecular Binding Motifs (Hydrogen-Bonding, Stacking, X-H···π): WFT and DFT Calculations.Crystal structure of human interferon-γ receptor 2 reveals the structural basis for receptor specificity.Redesigning protein cavities as a strategy for increasing affinity in protein-protein interaction: interferon- γ receptor 1 as a model.Density functional theory augmented with an empirical dispersion term. Interaction energies and geometries of 80 noncovalent complexes compared withab initioquantum mechanics calculationsIncreasing affinity of interferon-γ receptor 1 to interferon-γ by computer-aided design.Energy barriers between H-bonded and stacked structures of 9-methyladenine...1-methylthymine and 9-methylguanine...1-methylcytosine complexes.The amino group in adenine: MP2 and CCSD(T) complete basis set limit calculations of the planarization barrier and DFT/B3LYP study of the anharmonic frequencies of adenine.Effect of noncovalent interactions on the n-butylbenzene...Ar cluster studied by mass analyzed threshold ionization spectroscopy and ab initio computations.Rigid duplex alpha-cyclodextrin reversibly connected with disulfide bonds. Synthesis and inclusion complexes.State of the art theoretical study and comparison to experiment for the phenol...argon complex.A DNA Structural Alphabet Distinguishes Structural Features of DNA Bound to Regulatory Proteins and in the Nucleosome Core Particle.Preferential Inhibition of Tonically over Phasically Activated NMDA Receptors by Pregnane Derivatives.A DNA structural alphabet provides new insight into DNA flexibility.The LILI Motif of M3-S2 Linkers Is a Component of the NMDA Receptor Channel Gate.Surface Expression, Function, and Pharmacology of Disease-Associated Mutations in the Membrane Domain of the Human GluN2B Subunit.Thermodynamic penalty arising from burial of a ligand polar group within a hydrophobic pocket of a protein receptor.Resolution of identity density functional theory augmented with an empirical dispersion term (RI-DFT-D): a promising tool for studying isolated small peptides.CD9 and CD81 Interactions and Their Structural Modelling in Sperm Prior to Fertilization.The crystal structure of XdpB, the bacterial old yellow enzyme, in an FMN-free form.
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description
bioinformatik a imunolog z Biotechnologického ústavu AV ČR
@cs
researcher
@en
wetenschapper
@nl
հետազոտող
@hy
name
Jiri Cerny
@ast
Jiri Cerny
@en
Jiri Cerny
@es
Jiri Cerny
@nl
Jiří Černý
@cs
type
label
Jiri Cerny
@ast
Jiri Cerny
@en
Jiri Cerny
@es
Jiri Cerny
@nl
Jiří Černý
@cs
prefLabel
Jiri Cerny
@ast
Jiri Cerny
@en
Jiri Cerny
@es
Jiri Cerny
@nl
Jiří Černý
@cs
P106
P31
P496
0000-0002-1969-9304