Repetitive DNA and next-generation sequencing: computational challenges and solutions
about
REAPR: a universal tool for genome assembly evaluationEstrogen receptor alpha gene amplification in breast cancer: 25 years of debateChromosomes in the flow to simplify genome analysisWell-characterized sequence features of eukaryote genomes and implications for ab initio gene predictionAlignment of Short Reads: A Crucial Step for Application of Next-Generation Sequencing Data in Precision MedicineBig Data Analytics in Healthcare.Do mutator mutations fuel tumorigenesis?Structural variation discovery in the cancer genome using next generation sequencing: computational solutions and perspectivesThe role of transposable elements in health and diseases of the central nervous systemDistinguishing highly similar gene isoforms with a clustering-based bioinformatics analysis of PacBio single-molecule long readsCombinatorial pooling enables selective sequencing of the barley gene spaceA Review of Computational Methods for Finding Non-Coding RNA GenesIntegrating next-generation sequencing into clinical oncology: strategies, promises and pitfallsWithin-host evolution of bacterial pathogens.Metagenomic Assembly: Overview, Challenges and ApplicationsRecovering complete and draft population genomes from metagenome datasetsSensitive Detection and Simultaneous Discrimination of Influenza A and B Viruses in Nasopharyngeal Swabs in a Single Assay Using Next-Generation Sequencing-Based DiagnosticsDeciphering fact from artifact when using reporter assays to investigate the roles of host factors on L1 retrotranspositionThe devil is in the details: Transposable element analysis of the Tasmanian devil genomeComplete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome speciesHot spots of DNA double-strand breaks and genomic contacts of human rDNA units are involved in epigenetic regulationDistinctive expansion of gene families associated with plant cell wall degradation, secondary metabolism, and nutrient uptake in the genomes of grapevine trunk pathogensEvolutionary histories of transposable elements in the genome of the largest living marsupial carnivore, the Tasmanian devilMeiotic recombination initiation in and around retrotransposable elements in Saccharomyces cerevisiaeAre differences in genomic data sets due to true biological variants or errors in genome assembly: an example from two chloroplast genomesNanomicroarray and multiplex next-generation sequencing for simultaneous identification and characterization of influenza viruses.Genome-wide SNP identification for the construction of a high-resolution genetic map of Japanese flounder (Paralichthys olivaceus): applications to QTL mapping of Vibrio anguillarum disease resistance and comparative genomic analysis.Non-random DNA fragmentation in next-generation sequencing.Elucidating and mining the Tulipa and Lilium transcriptomes.New insights from existing sequence data: generating breakthroughs without a pipetteExome-based analysis for RNA epigenome sequencing data.A practical method to detect SNVs and indels from whole genome and exome sequencing data.Modeling alternative splicing variants from RNA-Seq data with isoform graphs.VarBin, a novel method for classifying true and false positive variants in NGS data.Efficient digest of high-throughput sequencing data in a reproducible report.A protocol for RNA methylation differential analysis with MeRIP-Seq data and exomePeak R/Bioconductor package.High-Performance Integrated Virtual Environment (HIVE) Tools and Applications for Big Data Analysis.T-lex2: genotyping, frequency estimation and re-annotation of transposable elements using single or pooled next-generation sequencing dataIdentification of RNA polymerase III-transcribed Alu loci by computational screening of RNA-Seq data.Improved data analysis for the MinION nanopore sequencer
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P2860
Repetitive DNA and next-generation sequencing: computational challenges and solutions
description
2012 nî lūn-bûn
@nan
2012 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@ast
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@en
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@en-gb
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@nl
type
label
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@ast
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@en
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@en-gb
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@nl
prefLabel
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@ast
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@en
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@en-gb
Repetitive DNA and next-generation sequencing: computational challenges and solutions
@nl
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Repetitive DNA and next-generation sequencing: computational challenges and solutions
@en
P2093
Todd J Treangen
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P2888
P3181
P356
10.1038/NRG3117
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P577
2012-01-01T00:00:00Z
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P6179
1044335233