Improved data analysis for the MinION nanopore sequencer - Test2 - elhamkhani - TriplyDB

Improved data analysis for the MinION nanopore sequencer

Improved data analysis for the MinION nanopore sequencer

http://www.wikidata.org/entity/Q30893625

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Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis.Real-time, portable genome sequencing for Ebola surveillance Rapid draft sequencing and real-time nanopore sequencing in a hospital outbreak of Salmonella MinION: A Novel Tool for Predicting Drug Hypersensitivity?The implications of whole-genome sequencing in the control of tuberculosis Challenges, Solutions, and Quality Metrics of Personal Genome Assembly in Advancing Precision Medicine Transposable element detection from whole genome sequence data Analysis of single nucleic acid molecules in micro- and nano-fluidics Cracking the Code of Human Diseases Using Next-Generation Sequencing: Applications, Challenges, and Perspectives Formation of droplet interface bilayers in a Teflon tube Oxford Nanopore MinION Sequencing and Genome Assembly Host-Microbiome Interaction and Cancer: Potential Application in Precision Medicine Genotyping by sequencing approaches to characterise crop genomes: choosing the right tool for the right application Detection of Genomic Structural Variants from Next-Generation Sequencing Data DNA nanotechnology: new adventures for an old warhorse A disruptive sequencer meets disruptive publishing High-throughput sequencing technologies Genome Sequencing of the Behavior Manipulating Virus LbFV Reveals a Possible New Virus Family.NanoOK: multi-reference alignment analysis of nanopore sequencing data, quality and error profiles A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data MinION Analysis and Reference Consortium: Phase 1 data release and analysis.HPG pore: an efficient and scalable framework for nanopore sequencing data.A comparison of tools for the simulation of genomic next-generation sequencing data.Characterization of MinION nanopore data for resequencing analyses.Innovations and challenges in detecting long read overlaps: an evaluation of the state-of-the-art Genome graphs and the evolution of genome inference Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.Parallel ClickSeq and Nanopore sequencing elucidates the rapid evolution of defective-interfering RNAs in Flock House virus.de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer.Clinical Genomics: Challenges and Opportunities Successful test launch for nanopore sequencing.Denoising DNA deep sequencing data-high-throughput sequencing errors and their correction.A complete bacterial genome assembled de novo using only nanopore sequencing data.Rapid Short-Read Sequencing and Aneuploidy Detection Using MinION Nanopore Technology Bacterial and viral identification and differentiation by amplicon sequencing on the MinION nanopore sequencer.SMRT Sequencing of Long Tandem Nucleotide Repeats in SCA10 Reveals Unique Insight of Repeat Expansion Structure DNA Barcoding through Quaternary LDPC Codes.Unfolding Kinetics of the Human Telomere i-Motif Under a 10 pN Force Imposed by the α-Hemolysin Nanopore Identify Transient Folded-State Lifetimes at Physiological pH.LINKS: Scalable, alignment-free scaffolding of draft genomes with long reads.Errors in RNA-Seq quantification affect genes of relevance to human disease.

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Improved data analysis for the MinION nanopore sequencer

http://www.wikidata.org/entity/Q30893625

description

2015 nî lūn-bûn

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2015 թուականի Փետրուարին հրատարակուած գիտական յօդուած

@hyw

2015 թվականի փետրվարին հրատարակված գիտական հոդված

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2015年の論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年论文

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name

Improved data analysis for the MinION nanopore sequencer

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Improved data analysis for the MinION nanopore sequencer

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type

label

Improved data analysis for the MinION nanopore sequencer

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Improved data analysis for the MinION nanopore sequencer

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prefLabel

Improved data analysis for the MinION nanopore sequencer

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Improved data analysis for the MinION nanopore sequencer

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Improved data analysis for the MinION nanopore sequencer

@en

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Hugh E Olsen

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Ian T Fiddes

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Karen H Miga

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Mark Akeson

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Miten Jain

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P2860

Repetitive DNA and next-generation sequencing: computational challenges and solutions

Basic local alignment search tool

Single nucleotide polymorphisms in Mycobacterium tuberculosis and the need for a curated database

Profile hidden Markov models

Enredo and Pecan: genome-wide mammalian consistency-based multiple alignment with paralogs

BEDTools: a flexible suite of utilities for comparing genomic features.

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer.

Incorporating sequence quality data into alignment improves DNA read mapping.

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10.1038/NMETH.3290

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4

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25686389

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