ProbCons: Probabilistic consistency-based multiple sequence alignment - Test2 - elhamkhani - TriplyDB

ProbCons: Probabilistic consistency-based multiple sequence alignment

ProbCons: Probabilistic consistency-based multiple sequence alignment

http://www.wikidata.org/entity/Q24557418

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Protein X of hepatitis B virus: origin and structure similarity with the central domain of DNA glycosylase Genetic evidence for a mitochondriate ancestry in the 'amitochondriate' flagellate Trimastix pyriformis Rodent phylogeny revised: analysis of six nuclear genes from all major rodent clades Armadillo 1.1: an original workflow platform for designing and conducting phylogenetic analysis and simulations Fast statistical alignment Recent evolutions of multiple sequence alignment algorithms Surprising complexity of the ancestral apoptosis network Transcriptome analysis reveals nuclear-encoded proteins for the maintenance of temporary plastids in the dinoflagellate Dinophysis acuminata Identification of the Otopetrin Domain, a conserved domain in vertebrate otopetrins and invertebrate otopetrin-like family members Logarithmic gap costs decrease alignment accuracy Accurate multiple sequence alignment of transmembrane proteins with PSI-Coffee Molecular basis of HHQ biosynthesis: molecular dynamics simulations, enzyme kinetic and surface plasmon resonance studies.The genome sequence of the model ascomycete fungus Podospora anserina Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives A formal test of the theory of universal common ancestry KCTD5, a putative substrate adaptor for cullin3 ubiquitin ligases Accelerated probabilistic inference of RNA structure evolution Template-based protein structure modeling Use of ChIP-Seq data for the design of a multiple promoter-alignment method T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension RNAG: a new Gibbs sampler for predicting RNA secondary structure for unaligned sequences Structural and molecular evolutionary analysis of Agouti and Agouti-related proteins Recruitment of the RNA helicase RHAU to stress granules via a unique RNA-binding domain TurboFold: iterative probabilistic estimation of secondary structures for multiple RNA sequences IPknot: fast and accurate prediction of RNA secondary structures with pseudoknots using integer programming Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates Improving the accuracy of predicting secondary structure for aligned RNA sequences Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees R-Coffee: a web server for accurately aligning noncoding RNA sequences Upcoming challenges for multiple sequence alignment methods in the high-throughput era The linker region in receptor guanylyl cyclases is a key regulatory module: mutational analysis of guanylyl cyclase C Kalign2: high-performance multiple alignment of protein and nucleotide sequences allowing external features R-Coffee: a method for multiple alignment of non-coding RNA The 20 years of PROSITE Predictions of RNA secondary structure by combining homologous sequence information Unifying evolutionary and thermodynamic information for RNA folding of multiple alignments An enhanced RNA alignment benchmark for sequence alignment programs Multiple molecular evidences for a living mammalian fossil.The accuracy of several multiple sequence alignment programs for proteins Restriction endonuclease BpuJI specific for the 5'-CCCGT sequence is related to the archaeal Holliday junction resolvase family

P2860

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P2860

ProbCons: Probabilistic consistency-based multiple sequence alignment

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2005 nî lūn-bûn

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2005 թուականի Փետրուարին հրատարակուած գիտական յօդուած

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2005 թվականի փետրվարին հրատարակված գիտական հոդված

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2005年の論文

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2005年学术文章

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2005年学术文章

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2005年学术文章

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name

ProbCons: Probabilistic consistency-based multiple sequence alignment

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ProbCons: Probabilistic consistency-based multiple sequence alignment

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ProbCons: Probabilistic consistency-based multiple sequence alignment

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type

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ProbCons: Probabilistic consistency-based multiple sequence alignment

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ProbCons: Probabilistic consistency-based multiple sequence alignment

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ProbCons: Probabilistic consistency-based multiple sequence alignment

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ProbCons: Probabilistic consistency-based multiple sequence alignment

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ProbCons: Probabilistic consistency-based multiple sequence alignment

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ProbCons: Probabilistic consistency-based multiple sequence alignment

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Genome Research

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ProbCons: Probabilistic consistency-based multiple sequence alignment

@en

P2093

Chuong B Do

http://www.w3.org/2001/XMLSchema#string

Mahathi S P Mahabhashyam

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P2860

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

SAGA: sequence alignment by genetic algorithm

A comprehensive comparison of multiple sequence alignment programs

Amino acid substitution matrices from protein blocks

The Pfam protein families database

MUSCLE: multiple sequence alignment with high accuracy and high throughput

The neighbor-joining method: a new method for reconstructing phylogenetic trees

Protein secondary structure prediction based on position-specific scoring matrices

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330-40

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666658

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10.1101/GR.2821705

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2

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15

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Serafim Batzoglou

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8045808

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15687296

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546535

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