IPknot: fast and accurate prediction of RNA secondary structures with pseudoknots using integer programming
about
Multi-objective genetic algorithm for pseudoknotted RNA sequence designPredicting pseudoknotted structures across two RNA sequencesSmall molecule compounds targeting miRNAs for cancer therapyComputational analysis of noncoding RNAsDiverse forms of RPS9 splicing are part of an evolving autoregulatory circuitComputational approaches towards understanding human long non-coding RNA biologyRfam 11.0: 10 years of RNA familiesA Dynamic 3D Graphical Representation for RNA Structure Analysis and Its Application in Non-Coding RNA ClassificationCompaRNA: a server for continuous benchmarking of automated methods for RNA secondary structure predictionShape and secondary structure prediction for ncRNAs including pseudoknots based on linear SVMDirect updating of an RNA base-pairing probability matrix with marginal probability constraintsRtips: fast and accurate tools for RNA 2D structure prediction using integer programmingFASTR: A novel data format for concomitant representation of RNA sequence and secondary structure information.Computational modeling of RNA 3D structures, with the aid of experimental restraints.DAFS: simultaneous aligning and folding of RNA sequences via dual decomposition.antaRNA--Multi-objective inverse folding of pseudoknot RNA using ant-colony optimization.Prediction and classification of ncRNAs using structural informationEnhancement of accuracy and efficiency for RNA secondary structure prediction by sequence segmentation and MapReduceA fast and robust iterative algorithm for prediction of RNA pseudoknotted secondary structures.Prediction of uridine modifications in tRNA sequencesMulti-objective optimization for RNA design with multiple target secondary structuresA classification of bioinformatics algorithms from the viewpoint of maximizing expected accuracy (MEA)An Adaptive Defect Weighted Sampling Algorithm to Design Pseudoknotted RNA Secondary StructuresAccurate Classification of RNA Structures Using Topological FingerprintsURS DataBase: universe of RNA structures and their motifs.Rtools: a web server for various secondary structural analyses on single RNA sequences.Capturing RNA Folding Free Energy with Coarse-Grained Molecular Dynamics Simulations.Understanding the transcriptome through RNA structure.Mammalian Mitochondrial ncRNA Database.Comparative and integrative analysis of RNA structural profiling data: current practices and emerging questions.Design of RNAs: comparing programs for inverse RNA folding.Structure-Function Model for Kissing Loop Interactions That Initiate Dimerization of Ty1 RNA.In Silico Prediction of RNA Secondary Structure.The effects of structure on pre-mRNA processing and stability.New models of Tetrahymena telomerase RNA from experimentally derived constraints and modeling.Messenger RNAs bearing tRNA-like features exemplified by interferon alfa 5 mRNA.nRC: non-coding RNA Classifier based on structural features.Towards 3D structure prediction of large RNA molecules: an integer programming framework to insert local 3D motifs in RNA secondary structure.Fine-grained parallelism accelerating for RNA secondary structure prediction with pseudoknots based on FPGA.Dynamic landscape and regulation of RNA editing in mammals.
P2860
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P2860
IPknot: fast and accurate prediction of RNA secondary structures with pseudoknots using integer programming
description
2011 nî lūn-bûn
@nan
2011 թուականի Յուլիսին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի հուլիսին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
IPknot: fast and accurate pred ...... nots using integer programming
@ast
IPknot: fast and accurate pred ...... nots using integer programming
@en
IPknot: fast and accurate pred ...... nots using integer programming
@nl
type
label
IPknot: fast and accurate pred ...... nots using integer programming
@ast
IPknot: fast and accurate pred ...... nots using integer programming
@en
IPknot: fast and accurate pred ...... nots using integer programming
@nl
prefLabel
IPknot: fast and accurate pred ...... nots using integer programming
@ast
IPknot: fast and accurate pred ...... nots using integer programming
@en
IPknot: fast and accurate pred ...... nots using integer programming
@nl
P2860
P50
P3181
P356
P1433
P1476
IPknot: fast and accurate pred ...... nots using integer programming
@en
P2093
Kiyoshi Asai
P2860
P304
P3181
P356
10.1093/BIOINFORMATICS/BTR215
P407
P577
2011-07-01T00:00:00Z