Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data - Test2 - elhamkhani - TriplyDB

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

http://www.wikidata.org/entity/Q24595121

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Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seq Evaluation of algorithm performance in ChIP-seq peak detection Experimental characterization of the human non-sequence-specific nucleic acid interactome On the immortality of television sets: "function" in the human genome according to the evolution-free gospel of ENCODE Concise review: new paradigms for Down syndrome research using induced pluripotent stem cells: tackling complex human genetic disease Leiomodin 1, a new serum response factor-dependent target gene expressed preferentially in differentiated smooth muscle cells The BTB and CNC homology 1 (BACH1) target genes are involved in the oxidative stress response and in control of the cell cycle The BEN domain is a novel sequence-specific DNA-binding domain conserved in neural transcriptional repressors Next-generation sequencing in aging research: emerging applications, problems, pitfalls and possible solutions MUSI: an integrated system for identifying multiple specificity from very large peptide or nucleic acid data sets Insights from genomic profiling of transcription factors High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells Blood pressure loci identified with a gene-centric array Dynamic exchange at regulatory elements during chromatin remodeling underlies assisted loading mechanism Tbx20 regulates a genetic program essential to adult mouse cardiomyocyte function Uncovering transcription factor modules using one- and three-dimensional analyses Integrating Epigenomics into the Understanding of Biomedical Insight The short and long of noncoding sequences in the control of vascular cell phenotypes Protein-DNA binding in high-resolution ChIP-seq accurately predicts tissue-specific activity of enhancers ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia ChIP-Seq identification of weakly conserved heart enhancers The Effects of Sequence Variation on Genome-wide NRF2 Binding--New Target Genes and Regulatory SNPs A genomic regulatory element that directs assembly and function of immune-specific AP-1-IRF complexes Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells Cohesin regulates tissue-specific expression by stabilizing highly occupied cis-regulatory modules Distinct global shifts in genomic binding profiles of limb malformation-associated HOXD13 mutations Common and distinct DNA-binding and regulatory activities of the BEN-solo transcription factor family Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle Integrated metabolic modelling reveals cell-type specific epigenetic control points of the macrophage metabolic network Insights into neural crest development and evolution from genomic analysis What we can learn about Escherichia coli through application of Gene Ontology High resolution detection and analysis of CpG dinucleotides methylation using MBD-Seq technology Functional variants in NFKBIE and RTKN2 involved in activation of the NF-κB pathway are associated with rheumatoid arthritis in Japanese Rif1 prevents resection of DNA breaks and promotes immunoglobulin class switching A unique chromatin signature uncovers early developmental enhancers in humans GREAT improves functional interpretation of cis-regulatory regions ChIP-seq: advantages and challenges of a maturing technology JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles A low-cost library construction protocol and data analysis pipeline for Illumina-based strand-specific multiplex RNA-seq

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Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

http://www.wikidata.org/entity/Q24595121

description

2008 nî lūn-bûn

@nan

2008 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2008 թվականի սեպտեմբերին հրատարակված գիտական հոդված

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2008年の論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年论文

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name

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

@ast

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

@en

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

@nl

type

label

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

@ast

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

@en

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

@nl

prefLabel

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

@ast

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

@en

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

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Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

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Anton Valouev

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Arend Sidow

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Catherine Medina

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David S Johnson

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Elizabeth Anton

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Serum response factor binding sites differ in three human cell types

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

WebLogo: A Sequence Logo Generator

High-resolution profiling of histone methylations in the human genome

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

The SRF target gene Fhl2 antagonizes RhoA/MAL-dependent activation of SRF

Genome-wide mapping of in vivo protein-DNA interactions

Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

Interaction of CArG elements and a GC-rich repressor element in transcriptional regulation of the smooth muscle myosin heavy chain gene in vascular smooth muscle cells.

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829-34

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10.1038/NMETH.1246

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9

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5

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Serafim Batzoglou

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