EcoCyc: a comprehensive database of Escherichia coli biology - Test2 - elhamkhani - TriplyDB

EcoCyc: a comprehensive database of Escherichia coli biology

EcoCyc: a comprehensive database of Escherichia coli biology

http://www.wikidata.org/entity/Q24612081

about

The genome organization of Thermotoga maritima reflects its lifestyle The complete genome and phenome of a community-acquired Acinetobacter baumannii Genome-scale engineering for systems and synthetic biology BSRD: a repository for bacterial small regulatory RNA CharProtDB: a database of experimentally characterized protein annotations Library of Apicomplexan Metabolic Pathways: a manually curated database for metabolic pathways of apicomplexan parasites Nutrient salvaging and metabolism by the intracellular pathogen Legionella pneumophila Escherichia coli redox mutants as microbial cell factories for the synthesis of reduced biochemicals.Characterizing the state of the art in the computational assignment of gene function: lessons from the first critical assessment of functional annotation (CAFA)Macro-to-Micro Structural Proteomics: Native Source Proteins for High-Throughput Crystallization Revealing the amino acid composition of proteins within an expanded genetic code Small, smaller, smallest: the origins and evolution of ancient dual symbioses in a Phloem-feeding insect Genomically recoded organisms expand biological functions Enzymes are enriched in bacterial essential genes The CanOE strategy: integrating genomic and metabolic contexts across multiple prokaryote genomes to find candidate genes for orphan enzymes Inference of quantitative models of bacterial promoters from time-series reporter gene data CONSTRICTOR: constraint modification provides insight into design of biochemical networks Inferring the relation between transcriptional and posttranscriptional regulation from expression compendia Improving ethanol tolerance of Escherichia coli by rewiring its global regulator cAMP receptor protein (CRP)Multiple-omic data analysis of Klebsiella pneumoniae MGH 78578 reveals its transcriptional architecture and regulatory features WholeCellKB: model organism databases for comprehensive whole-cell models Exploring and linking biomedical resources through multidimensional semantic spaces EcoliWiki: a wiki-based community resource for Escherichia coli Endonucleolytic cleavages by RNase E generate the mature 3' termini of the three proline tRNAs in Escherichia coli Construction and completion of flux balance models from pathway databases Genome Reduction and Co-evolution between the Primary and Secondary Bacterial Symbionts of Psyllids Evaluation of research in biomedical ontologies MetNet Online: a novel integrated resource for plant systems biology.GoSynthetic database tool to analyse natural and engineered molecular processes RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.Nitrogen assimilation in Escherichia coli: putting molecular data into a systems perspective Integrating gene and protein expression data with genome-scale metabolic networks to infer functional pathways Cautions about the reliability of pairwise gene correlations based on expression data.EcoBrowser: a web-based tool for visualizing transcriptome data of Escherichia coli.Evidence-based annotation of gene function in Shewanella oneidensis MR-1 using genome-wide fitness profiling across 121 conditions.Regulatory network operations in the Pathway Tools software.STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation.Directional RNA-seq reveals highly complex condition-dependent transcriptomes in E. coli K12 through accurate full-length transcripts assembling.How does Tremblaya princeps get essential proteins from its nested partner Moranella endobia in the Mealybug Planoccocus citri?Determining the control circuitry of redox metabolism at the genome-scale.

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P2860

EcoCyc: a comprehensive database of Escherichia coli biology

http://www.wikidata.org/entity/Q24612081

description

2011 nî lūn-bûn

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2011 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2011 թվականի հունվարին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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EcoCyc: a comprehensive database of Escherichia coli biology

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EcoCyc: a comprehensive database of Escherichia coli biology

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EcoCyc: a comprehensive database of Escherichia coli biology

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EcoCyc: a comprehensive database of Escherichia coli biology

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EcoCyc: a comprehensive database of Escherichia coli biology

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Nucleic Acids Research

P1476

EcoCyc: a comprehensive database of Escherichia coli biology

@en

P2093

Aaron Spaulding

http://www.w3.org/2001/XMLSchema#string

Alexander G Shearer

http://www.w3.org/2001/XMLSchema#string

Amanda Mackie

http://www.w3.org/2001/XMLSchema#string

Carol Fulcher

http://www.w3.org/2001/XMLSchema#string

César Bonavides-Martinez

http://www.w3.org/2001/XMLSchema#string

Ingrid M Keseler

http://www.w3.org/2001/XMLSchema#string

John Pacheco

http://www.w3.org/2001/XMLSchema#string

Luis Muñiz-Rascado

http://www.w3.org/2001/XMLSchema#string

Malabika Sarker

http://www.w3.org/2001/XMLSchema#string

Mario Latendresse

http://www.w3.org/2001/XMLSchema#string

P2860

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

Textpresso: an ontology-based information retrieval and extraction system for biological literature

The BioPAX community standard for pathway data sharing

What we can learn about Escherichia coli through application of Gene Ontology

The Gene Ontology in 2010: extensions and refinements

An advanced web query interface for biological databases

RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.

DNA microarray analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli.

Biological insights from structures of two-component proteins.

RSAT: regulatory sequence analysis tools.

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D583-90

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scholarly article

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413350

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10.1093/NAR/GKQ1143

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P433

Database issue

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P478

39

http://www.w3.org/2001/XMLSchema#string

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Julio Collado-Vides

Martin Peralta-Gil

Alberto Santos-Zavaleta

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2011-01-01T00:00:00Z

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P5875

49629058

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21097882

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Escherichia coli

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3013716

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