Challenges of ligand identification for riboswitch candidates - Test2 - elhamkhani - TriplyDB

Challenges of ligand identification for riboswitch candidates

Challenges of ligand identification for riboswitch candidates

http://www.wikidata.org/entity/Q24630065

about

Computational biology of RNA interactions Small RNAs for defence and regulation in archaea Emerging applications of riboswitches - from antibacterial targets to molecular tools Riboswitches in eubacteria sense the second messenger c-di-AMP An ancient riboswitch class in bacteria regulates purine biosynthesis and one-carbon metabolism Prospects for riboswitch discovery and analysis Common themes and differences in SAM recognition among SAM riboswitches The ubiquitous yybP-ykoY riboswitch is a manganese-responsive regulatory element.Mn(2+)-sensing mechanisms of yybP-ykoY orphan riboswitches.Computational analysis of riboswitch-based regulation Global RNA Fold and Molecular Recognition for a pfl Riboswitch Bound to ZMP, a Master Regulator of One-Carbon Metabolism The yjdF riboswitch candidate regulates gene expression by binding diverse azaaromatic compounds.Comparative genomics of metabolic capacities of regulons controlled by cis-regulatory RNA motifs in bacteria.Metal Ion-Mediated Nucleobase Recognition by the ZTP Riboswitch.Microfluidic screening of electrophoretic mobility shifts elucidates riboswitch binding function Biochemical Validation of a Second Guanidine Riboswitch Class in Bacteria.Finding aptamers and small ribozymes in unexpected places.Biochemical Validation of a Third Guanidine Riboswitch Class in Bacteria.Metalloriboswitches: RNA-based inorganic ion sensors that regulate genes.Bioinformatic analysis of riboswitch structures uncovers variant classes with altered ligand specificity.Bacterial RNA motif in the 5' UTR of rpsF interacts with an S6:S18 complex.Transcriptomic profiles of Clostridium ljungdahlii during lithotrophic growth with syngas or H2 and CO2 compared to organotrophic growth with fructose Riboswitch diversity and distribution.Challenges of ligand identification for the second wave of orphan riboswitch candidates.Structural Basis for Ligand Binding to the Guanidine-I Riboswitch.Metabolism of Free Guanidine in Bacteria Is Regulated by a Widespread Riboswitch Class.Tandem riboswitches form a natural Boolean logic gate to control purine metabolism in bacteria.Structural basis for guanidine sensing by the ykkC family of riboswitches.Riboswitches for the alarmone ppGpp expand the collection of RNA-based signaling systems.

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Challenges of ligand identification for riboswitch candidates

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2011 nî lūn-bûn

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2011 թուականին հրատարակուած գիտական յօդուած

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2011 թվականին հրատարակված գիտական հոդված

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2011年論文

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2011年論文

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Challenges of ligand identification for riboswitch candidates

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Challenges of ligand identification for riboswitch candidates

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Challenges of ligand identification for riboswitch candidates

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Challenges of ligand identification for riboswitch candidates

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Challenges of ligand identification for riboswitch candidates

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Challenges of ligand identification for riboswitch candidates

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Challenges of ligand identification for riboswitch candidates

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Challenges of ligand identification for riboswitch candidates

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Challenges of ligand identification for riboswitch candidates

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Challenges of ligand identification for riboswitch candidates

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Adam Roth

http://www.w3.org/2001/XMLSchema#string

Michelle M Meyer

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Ming C Hammond

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Narasimhan Sudarsan

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Yasmmyn Salinas

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P2860

Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria

Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes

The distributions, mechanisms, and structures of metabolite-binding riboswitches

Abundance and functional diversity of riboswitches in microbial communities

Determinant of cistron specificity in bacterial ribosomes

New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control

Evidence for widespread gene control function by the ydaO riboswitch candidate

A human gut microbial gene catalogue established by metagenomic sequencing

A eubacterial riboswitch class that senses the coenzyme tetrahydrofolate

A widespread riboswitch candidate that controls bacterial genes involved in molybdenum cofactor and tungsten cofactor metabolism

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