SCWRL and MolIDE: computer programs for side-chain conformation prediction and homology modeling
about
A new model for allosteric regulation of phenylalanine hydroxylase: implications for disease and therapeuticsAssignment of protein sequences to existing domain and family classification systems: Pfam and the PDBImproved prediction of protein side-chain conformations with SCWRL4Open and shut: Crystal structures of the dodecylmaltoside solubilized mechanosensitive channel of small conductance fromEscherichia coliandHelicobacter pyloriat 4.4 Å and 4.1 Å resolutionsConsistent refinement of submitted models at CASP using a knowledge-based potentialPresaging critical residues in protein interfaces-web server (PCRPi-W): a web server to chart hot spots in protein interfacesStructural Studies of the HIV-1 Integrase Protein: Compound Screening and Characterization of a DNA-Binding InhibitorFAM46 proteins are novel eukaryotic non-canonical poly(A) polymerasesAchievements and challenges in structural bioinformatics and computational biophysicsCritical assessment of methods of protein structure prediction (CASP)--round xComparative protein structure modeling using ModellerComparative Protein Structure Modeling Using MODELLERTemplate-based protein modeling: recent methodological advances.Performance of protein-structure predictions with the physics-based UNRES force field in CASP11.One-Dimensional Structural Properties of Proteins in the Coarse-Grained CABS Model.An Integrated Database for Complex Protein Structure Modeling.Prediction of protein mutation effects based on dehydration and hydrogen bonding - A large-scale study.A protein-dependent side-chain rotamer library.3Drefine: consistent protein structure refinement by optimizing hydrogen bonding network and atomic-level energy minimization.A bifunctional regulatory element in human somatic Wee1 mediates cyclin A/Cdk2 binding and Crm1-dependent nuclear export.Detailed structural and assembly model of the type II secretion pilus from sparse dataMining genomes of marine cyanobacteria for elements of zinc homeostasis.A modified HSP70 inhibitor shows broad activity as an anticancer agent.Numb independently antagonizes Sanpodo membrane targeting and Notch signaling in Drosophila sensory organ precursor cells.Atomically detailed simulation of the recovery stroke in myosin by MilestoningVX hydrolysis by human serum paraoxonase 1: a comparison of experimental and computational results.Biophysics of protein evolution and evolutionary protein biophysicsBackbone dependency further improves side chain prediction efficiency in the Energy-based Conformer Library (bEBL).Rapid optimization and prototyping for therapeutic antibody-like molecules.Enhancing human spermine synthase activity by engineered mutationsRetroviral integrases promote fraying of viral DNA ends.Computational re-engineering of Amylin sequence with reduced amyloidogenic potential.Universal distribution of mutational effects on protein stability, uncoupling of protein robustness from sequence evolution and distinct evolutionary modes of prokaryotic and eukaryotic proteins.Role of mRNA structure in the control of protein foldingComprehensive optimization of a single-chain variable domain antibody fragment as a targeting ligand for a cytotoxic nanoparticle.A small-molecule screen yields idiotype-specific blockers of neuromyelitis optica immunoglobulin G binding to aquaporin-4.PIGSPro: prediction of immunoGlobulin structures v2Interferon-induced RIP1/RIP3-mediated necrosis requires PKR and is licensed by FADD and caspasesGenome-wide siRNA screen reveals a new cellular partner of NK cell receptor KIR2DL4: heparan sulfate directly modulates KIR2DL4-mediated responses.Kinase-mediated changes in nucleosome conformation trigger chromatin decondensation via poly(ADP-ribosyl)ation.
P2860
Q24617497-BD9F8576-376A-4431-B2DD-8492B2F79390Q24627406-96FD18BF-5775-4A0A-8D5E-415B75628E76Q24634442-82DB6CB7-8BAD-461B-A56B-FB024BD0013FQ27675948-D57C4A19-0617-46EE-AF55-F549495BE89AQ28286468-2858152F-A1AC-4CEE-8DF1-893C520AAAE4Q28475258-877F3F4F-1093-4DFB-ABA4-CD22C29B7FE6Q28547968-FB74E080-8AD0-405F-9E09-49BDC528D279Q28603241-1B3410CD-698D-4892-8D62-19BD480F02CAQ28649519-7297A8F6-38C9-4DA9-A335-DAA00A5FC16BQ29048203-EF9D3D91-15A6-45C8-9178-505518AD73C3Q29615142-18D5E611-0597-49CB-A13E-F585FC808F92Q30366550-D83F5BBE-0EBF-4BFA-A474-2645FB454CD7Q30382761-227222B8-D1E5-4E90-9499-BBD2F4218149Q30390128-20AC38BB-8F93-41F6-9B2A-2EB372F88D23Q30394572-3D35D94E-30CB-459A-96B5-E907E35AABFDQ30397313-D777DF6A-C85B-415C-851E-E646EF2A5E60Q30401819-E301F468-3BF7-44B0-B81F-EDFEFD38C53AQ30413617-9591B3E5-6982-4E27-9761-908113862910Q30420710-4E530C90-930D-46A5-B059-615DD043D73BQ30492543-1F2A32E0-4940-479C-A8C3-45EAC33E03B6Q30495999-BA622529-AFF9-4F74-9420-242BCA935D50Q30512952-60CCA834-3698-45FC-941E-8056527507EDQ30537961-EC81700F-6BBB-4929-A149-90116FFE5BBBQ33689806-7FCC8833-2CFD-4E5C-990D-DB072BA1076FQ33740078-7565DD67-11AD-4AC3-9D93-AA5A87138034Q33927146-DB461882-7CF2-479C-8424-C04A22B38404Q34311852-8FB29110-FB18-44A9-AA61-D9B625B68201Q34389044-FD87AB18-2416-4DA8-B2F9-DF18545B1967Q34580658-48483469-8710-4554-A843-A24637CB85B9Q34611078-2E3F0E67-30CB-47FC-A9C1-732B10F1959EQ35110947-65CCB8EF-6C70-45DD-8399-DDF72F495696Q35612061-5EC628C4-24C0-4BD0-9C8C-1B5C670C136AQ35618960-0C5700F5-0111-433D-95CF-7AA27CCEA9D5Q36088168-316C37DD-7A1A-4D88-BD4C-3DB5C3099C0EQ36212921-37913484-D7B0-412F-8C59-20AFF08E16CCQ36347678-6747FF8F-0CED-46CF-9630-132A3DDFC110Q36363396-53894E4C-1516-4AC8-8541-5A98ACCD043DQ37104059-FF4E1DB2-335F-4BCF-B096-00991716537BQ37332652-67378F9F-D1A0-486C-89D2-0E9663640215Q37633576-325ABC40-0588-4022-9E62-7F3E4348AE1C
P2860
SCWRL and MolIDE: computer programs for side-chain conformation prediction and homology modeling
description
2008 nî lūn-bûn
@nan
2008 թուականին հրատարակուած գիտական յօդուած
@hyw
2008 թվականին հրատարակված գիտական հոդված
@hy
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@ast
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@en
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@nl
type
label
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@ast
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@en
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@nl
prefLabel
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@ast
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@en
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@nl
P2860
P3181
P356
P1433
P1476
SCWRL and MolIDE: computer pro ...... ediction and homology modeling
@en
P2093
Adrian A Canutescu
Qiang Wang
P2283
P2860
P2888
P304
P3181
P356
10.1038/NPROT.2008.184
P407
P577
2008-01-01T00:00:00Z
P5875
P6179
1033608998