Improved prediction of protein side-chain conformations with SCWRL4 - Test2 - elhamkhani - TriplyDB

Improved prediction of protein side-chain conformations with SCWRL4

Improved prediction of protein side-chain conformations with SCWRL4

http://www.wikidata.org/entity/Q24634442

about

Sequence co-evolution gives 3D contacts and structures of protein complexes Genome-wide prediction and validation of peptides that bind human prosurvival Bcl-2 proteins Large scale characterization of the LC13 TCR and HLA-B8 structural landscape in reaction to 172 altered peptide ligands: a molecular dynamics simulation study IGF1R variants associated with isolated single suture craniosynostosis Modeling large regions in proteins: applications to loops, termini, and folding A smoothed backbone-dependent rotamer library for proteins derived from adaptive kernel density estimates and regressions PCRPi-DB: a database of computationally annotated hot spots in protein interfaces A new model for allosteric regulation of phenylalanine hydroxylase: implications for disease and therapeutics Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimization COFACTOR: an accurate comparative algorithm for structure-based protein function annotation A mutation in VPS35, encoding a subunit of the retromer complex, causes late-onset Parkinson disease Computational Approaches to Toll-Like Receptor 4 Modulation Computational methods in drug discovery Structural Rigidity and Protein Thermostability in Variants of Lipase A from Bacillus subtilis A Specialized Histone H1 Variant Is Required for Adaptive Responses to Complex Abiotic Stress and Related DNA Methylation in Arabidopsis Identification of a novel drug lead that inhibits HCV infection and cell-to-cell transmission by targeting the HCV E2 glycoprotein Cell contact-dependent outer membrane exchange in myxobacteria: genetic determinants and mechanism Structural Basis of Membrane Targeting by the Dock180 Family of Rho Family Guanine Exchange Factors (Rho-GEFs)Contrast-Matched Small-Angle X-ray Scattering from a Heavy-Atom-Labeled Protein in Structure Determination: Application to a Lead-Substituted Calmodulin–Peptide Complex Crystal structure of the entire respiratory complex I The Crystal Structures of the Eukaryotic Chaperonin CCT Reveal Its Functional Partitioning A disulfide bridge allows for site-selective binding in liver bile acid binding protein thereby stabilising the orientation of key amino acid side chains Crystal structure of a eukaryotic phosphate transporter Conformational Analysis of NMDA Receptor GluN1, GluN2, and GluN3 Ligand-Binding Domains Reveals Subtype-Specific Characteristics The c-ring ion binding site of the ATP synthase fromBacillus pseudofirmus OF4 is adapted to alkaliphilic lifestyle Structure-Based Mutational Studies of Substrate Inhibition of Betaine Aldehyde Dehydrogenase BetB from Staphylococcus aureus Structure of sulfamidase provides insight into the molecular pathology of mucopolysaccharidosis IIIA Structure of the oncoprotein Rcl bound to three nucleotide analogues Structure and Cell Wall Cleavage by Modular Lytic Transglycosylase MltC of Escherichia coli Computational design of water-soluble α-helical barrels A predicted binding site for cholesterol on the GABAA receptor Consistent refinement of submitted models at CASP using a knowledge-based potential Quantifying intramolecular binding in multivalent interactions: a structure-based synergistic study on Grb2-Sos1 complex Modeling of human prokineticin receptors: interactions with novel small-molecule binders and potential off-target drugs Redistribution of flexibility in stabilizing antibody fragment mutants follows Le Châtelier's principle Structural Model of the Bilitranslocase Transmembrane Domain Supported by NMR and FRET Data Ligand Discovery for the Alanine-Serine-Cysteine Transporter (ASCT2, SLC1A5) from Homology Modeling and Virtual Screening The SWISS-MODEL Repository-new features and functionality Structural Basis of Diverse Homophilic Recognition by Clustered α- and β-Protocadherins Engagement of nucleotide-binding oligomerization domain-containing protein 1 (NOD1) by receptor-interacting protein 2 (RIP2) is insufficient for signal transduction

P2860

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P2860

Improved prediction of protein side-chain conformations with SCWRL4

http://www.wikidata.org/entity/Q24634442

description

2009 nî lūn-bûn

@nan

2009 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի դեկտեմբերին հրատարակված գիտական հոդված

@hy

2009年の論文

@ja

2009年論文

@yue

2009年論文

@zh-hant

2009年論文

@zh-hk

2009年論文

@zh-mo

2009年論文

@zh-tw

2009年论文

@wuu

name

Improved prediction of protein side-chain conformations with SCWRL4

@ast

Improved prediction of protein side-chain conformations with SCWRL4

@en

Improved prediction of protein side-chain conformations with SCWRL4

@nl

type

label

Improved prediction of protein side-chain conformations with SCWRL4

@ast

Improved prediction of protein side-chain conformations with SCWRL4

@en

Improved prediction of protein side-chain conformations with SCWRL4

@nl

prefLabel

Improved prediction of protein side-chain conformations with SCWRL4

@ast

Improved prediction of protein side-chain conformations with SCWRL4

@en

Improved prediction of protein side-chain conformations with SCWRL4

@nl

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P1476

Improved prediction of protein side-chain conformations with SCWRL4

@en

P2093

Georgii G Krivov

http://www.w3.org/2001/XMLSchema#string

Maxim V Shapovalov

http://www.w3.org/2001/XMLSchema#string

P2860

Design of a Novel Globular Protein Fold with Atomic-Level Accuracy

SCWRL and MolIDE: computer programs for side-chain conformation prediction and homology modeling

Statistical analysis of interface similarity in crystals of homologous proteins

PISCES: recent improvements to a PDB sequence culling server

FFAS03: a server for profile--profile sequence alignments

A short history of SHELX

Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations

Rotamer libraries in the 21st century

Practical conversion from torsion space to Cartesian space for in silico protein synthesis

Backbone-dependent rotamer library for proteins. Application to side-chain prediction

P304

778-95

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

184522

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P356

10.1002/PROT.22488

http://www.w3.org/2001/XMLSchema#string

P407

P433

4

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P478

77

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P50

Roland Dunbrack

P577

2009-12-01T00:00:00Z

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26672034

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19603484

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2885146

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