OriDB: a DNA replication origin database - Test2 - elhamkhani - TriplyDB

OriDB: a DNA replication origin database

OriDB: a DNA replication origin database

http://www.wikidata.org/entity/Q24683354

about

Additions, losses, and rearrangements on the evolutionary route from a reconstructed ancestor to the modern Saccharomyces cerevisiae genome Initiation of DNA replication: functional and evolutionary aspects OriDB, the DNA replication origin database updated and extended Global effects of DNA replication and DNA replication origin activity on eukaryotic gene expression At short telomeres Tel1 directs early replication and phosphorylates Rif1.Rif1 controls DNA replication by directing Protein Phosphatase 1 to reverse Cdc7-mediated phosphorylation of the MCM complex Genome-wide replication profiles indicate an expansive role for Rpd3L in regulating replication initiation timing or efficiency, and reveal genomic loci of Rpd3 function in Saccharomyces cerevisiae.How MCM loading and spreading specify eukaryotic DNA replication initiation sites A Major Role of DNA Polymerase δ in Replication of Both the Leading and Lagging DNA Strands Division of labor at the eukaryotic replication fork The origin recognition complex interacts with a subset of metabolic genes tightly linked to origins of replication Nuclear mitochondrial DNA activates replication in Saccharomyces cerevisiae ATP-dependent chromatin remodeling shapes the DNA replication landscape Inferring the spatiotemporal DNA replication program from noisy data.Computational detection of significant variation in binding affinity across two sets of sequences with application to the analysis of replication origins in yeast.H3 k36 methylation helps determine the timing of cdc45 association with replication origins Hidden chromosome symmetry: in silico transformation reveals symmetry in 2D DNA walk trajectories of 671 chromosomes.Strategies for analyzing highly enriched IP-chip datasets.Budding yeast for budding geneticists: a primer on the Saccharomyces cerevisiae model system A comprehensive genome-wide map of autonomously replicating sequences in a naive genome.Domain within the helicase subunit Mcm4 integrates multiple kinase signals to control DNA replication initiation and fork progression.Fragile genomic sites are associated with origins of replication.G-quadruplex DNA sequences are evolutionarily conserved and associated with distinct genomic features in Saccharomyces cerevisiae Diversity of eukaryotic DNA replication origins revealed by genome-wide analysis of chromatin structure.Genome-wide model for the normal eukaryotic DNA replication fork.The conserved bromo-adjacent homology domain of yeast Orc1 functions in the selection of DNA replication origins within chromatin.Functional centromeres determine the activation time of pericentric origins of DNA replication in Saccharomyces cerevisiae.Asymmetry indices for analysis and prediction of replication origins in eukaryotic genomes.Analysis of stress-induced duplex destabilization (SIDD) properties of replication origins, genes and intergenes in the fission yeast, Schizosaccharomyces pombe High-resolution mapping, characterization, and optimization of autonomously replicating sequences in yeast.Chromatin dynamics during DNA replication Chromosome evolution with naked eye: palindromic context of the life origin.Systematic identification of fragile sites via genome-wide location analysis of gamma-H2AX.The effect of Ku on telomere replication time is mediated by telomere length but is independent of histone tail acetylation.Genome-wide chromatin footprinting reveals changes in replication origin architecture induced by pre-RC assembly Recent advances in the genome-wide study of DNA replication origins in yeast Break-seq reveals hydroxyurea-induced chromosome fragility as a result of unscheduled conflict between DNA replication and transcription Checkpoint-independent scaling of the Saccharomyces cerevisiae DNA replication program Databases and bioinformatics tools for the study of DNA repair.Endogenous DNA replication stress results in expansion of dNTP pools and a mutator phenotype

P2860

Q21092460-23920231-4C4B-4CC5-8459-40B66A9F439F Q24595725-3E4B983A-2D95-496C-B4FC-5F0F55A42D5D Q24619137-A588087D-19A2-4D40-AE1F-350378AEBA7A Q24654898-873E9FE8-1F40-4C28-B9C6-BFA1C4407870 Q27929847-819CE742-7DA6-4D43-922C-5125AD8A956C Q27937207-B6AC95B7-3619-4700-829A-7D45353B6143 Q27940045-4A47A1B9-0730-4BAF-880D-CCDB1DD76672 Q28066336-49AAD0E4-1CE3-45C5-87E9-2940FF7DFCF9 Q28264543-D833BC6E-4DC0-4642-98F4-F61FB073A206 Q28277921-CE8E2801-F5CD-4839-99DA-31932CB10F80 Q28472092-3FCFF0A0-D9D9-4D61-97DA-ADA25E336FC9 Q28742121-7DFC626A-7984-486B-AED5-251C59AB541A Q28754502-3DDD3255-0888-4206-9D46-D78F3698544C Q30800217-44D2B457-7A5A-4D06-BE05-D801B629C512 Q33368899-C9F86059-040A-4477-A710-C31E013F775F Q33466779-09FB5070-7E6C-42E8-9E17-F59720504D3B Q33487717-E8E1FB27-18B8-484C-B269-DF217F18FC0D Q33505850-038EE5F4-1F8E-4FC1-A900-BE9C2230DAD9 Q33575824-81159CB3-AA15-455E-98C9-88723CD5765D Q33582117-A5A0B470-C3D0-46F8-B085-C002E4EC2537 Q33607008-F9E35B43-C94F-41C6-9CAD-25CEF8A973B5 Q33633583-C75985DF-F9FC-47F8-8F19-A6024BDD8055 Q33646754-57B8DC17-19B0-49D6-AF50-E34594CFB652 Q33686941-0B60CEF6-5613-4FD4-8F0E-98DD91C395E2 Q33704744-044B9661-5F54-4774-A513-92105F166670 Q33953651-1EE5E1E0-3C22-461F-90D0-CEB011B3C51D Q34270486-3239B3E5-62DA-474C-9666-6BC3B11CE3B8 Q34427944-2A70626A-FF45-4FB9-BB6A-3DB3FE195F7C Q34481170-0556FD02-10E5-4D33-B5E0-60B07FFC48B8 Q34513428-172A8020-8F0F-4B3F-9FAA-5519572AE9F7 Q34528254-ADBB4C3F-ECAA-41BC-B747-8A1CC6E5AF19 Q34765937-EA42FAEE-E50E-42DC-8757-49C382D8487C Q34841266-5A5D258B-2EED-41D8-9153-7A7E657C2E7E Q34977327-E753BDFA-091C-4157-A2BF-E57BCDED01B5 Q34981658-4937F43F-5823-4BAD-8BDE-2E8C1A66E267 Q35099540-203642D6-8A45-486D-A1CB-757A378383C4 Q35157225-5A740598-0B5E-4D4A-8F66-477199BE5033 Q35307228-C6C3DD84-71D4-4B9B-8228-F30ADC43E2E6 Q35433303-E88951C3-BB1D-40D1-B8F0-AC204EA7709F Q35760007-AE9F7EE4-B0DA-4B11-9C13-C6100EC0DAFD

P2860

OriDB: a DNA replication origin database

http://www.wikidata.org/entity/Q24683354

description

2007 nî lūn-bûn

@nan

2007 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2007 թվականի հունվարին հրատարակված գիտական հոդված

@hy

2007年の論文

@ja

2007年論文

@yue

2007年論文

@zh-hant

2007年論文

@zh-hk

2007年論文

@zh-mo

2007年論文

@zh-tw

2007年论文

@wuu

name

OriDB: a DNA replication origin database

@ast

OriDB: a DNA replication origin database

@en

OriDB: a DNA replication origin database

@nl

type

label

OriDB: a DNA replication origin database

@ast

OriDB: a DNA replication origin database

@en

OriDB: a DNA replication origin database

@nl

prefLabel

OriDB: a DNA replication origin database

@ast

OriDB: a DNA replication origin database

@en

OriDB: a DNA replication origin database

@nl

P1433

Q24683354-38D5F445-C823-4EB2-A299-9090C0A55BF9

P1476

Q24683354-3AB5AFAF-026C-4388-8C7D-ADA9BA5D4AF6

P2093

Q24683354-2C4E0C43-89DC-4B06-8C3A-9F5A4BC81D3E

Q24683354-68142C7A-1243-4CE3-A869-1F5156154655

Q24683354-6B991170-2813-45B1-B0E7-DDCB1C7A22EC

Q24683354-CD1A5157-D1E0-4647-9379-F65ED9DE85EF

Q24683354-E62AF1DD-9EAB-4F57-B874-F500771B4D43

P2860

Q24683354-0E0AA7C5-610E-4400-846D-1F38D72D5387

Q24683354-15BAF62C-D202-4661-B054-E61C4AA8A5E5

Q24683354-18416BD9-25B9-4921-8EB1-F7BD1EBED9A3

Q24683354-1A63034B-D23B-4F5D-83F2-808B5C2ECE77

Q24683354-1ABA17C6-1B2E-437F-B1BF-712CB3AFCF3C

Q24683354-204F24D8-B6CB-4011-BD12-7E399AB5C5AE

Q24683354-266D27D0-E8D8-4987-BA8F-BB4A08542BCD

Q24683354-2E52F564-EE46-48E6-BF36-9EA1ABCDC5CE

Q24683354-56564B01-E694-455B-8037-718D203DF1D8

Q24683354-5F95B206-85F0-48BD-8DDA-721104C74745

P304

Q24683354-0A5CF63C-4A46-4F95-8792-973F804FBD11

P31

Q24683354-0042FBAE-30FD-4D6F-A1DB-6C3C0DBC4CED

P3181

Q24683354-D0455210-F90D-4B73-96F7-C57D50DCC58B

P356

Q24683354-50D38AFE-A530-4D65-B544-4B6584521475

P407

Q24683354-70ADC096-EE33-4F14-9D22-C3ADCB0C9126

P433

Q24683354-63272FAC-0231-48EF-8FC4-FD774AC78C0E

P478

Q24683354-2CA591E3-A212-4D2F-8B73-644F8BC1F3F2

P577

Q24683354-1CB50BCB-C701-45CD-81F2-376855882444

P5875

Q24683354-5422431C-169C-4B25-AD12-4842778BBE10

P698

Q24683354-0E953685-9BBA-41F0-B6E0-B66C1E71055A

P921

Q24683354-C6378D6B-EE00-48A2-8DEE-6405F2CAC9F7

P932

Q24683354-1761EFB3-142D-4D66-A980-ADC765CA3D8B

P3181

P356

P1433

Nucleic Acids Research

P1476

OriDB: a DNA replication origin database

@en

P2093

Anne D Donaldson

http://www.w3.org/2001/XMLSchema#string

Conrad A Nieduszynski

http://www.w3.org/2001/XMLSchema#string

Craig J Benham

http://www.w3.org/2001/XMLSchema#string

Prashanth Ak

http://www.w3.org/2001/XMLSchema#string

Shin-ichiro Hiraga

http://www.w3.org/2001/XMLSchema#string

P2860

Finding Functional Features in Saccharomyces Genomes by Phylogenetic Footprinting

Sequencing and comparison of yeast species to identify genes and regulatory elements

The UCSC Genome Browser Database: update 2006

Assembly of a complex containing Cdc45p, replication protein A, and Mcm2p at replication origins controlled by S-phase cyclin-dependent kinases and Cdc7p-Dbf4p kinase

The origin recognition complex interacts with a bipartite DNA binding site within yeast replicators

Initiation complex assembly at budding yeast replication origins begins with the recognition of a bipartite sequence by limiting amounts of the initiator, ORC

The requirement of yeast replication origins for pre-replication complex proteins is modulated by transcription.

Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae

Susceptibility to superhelically driven DNA duplex destabilization: a highly conserved property of yeast replication origins

Database resources of the National Center for Biotechnology Information

P304

D40-6

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

3902416

http://www.w3.org/2001/XMLSchema#string

P356

10.1093/NAR/GKL758

http://www.w3.org/2001/XMLSchema#string

P407

P433

Database issue

http://www.w3.org/2001/XMLSchema#string

P478

35

http://www.w3.org/2001/XMLSchema#string

P577

2007-01-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

6731601

http://www.w3.org/2001/XMLSchema#string

P698

17065467

http://www.w3.org/2001/XMLSchema#string

P921

P932

1781122

http://www.w3.org/2001/XMLSchema#string