Identification of RNA-protein interaction networks using PAR-CLIP - Test2 - elhamkhani - TriplyDB

Identification of RNA-protein interaction networks using PAR-CLIP

Identification of RNA-protein interaction networks using PAR-CLIP

http://www.wikidata.org/entity/Q27023093

about

Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo Advances in the characterization of RNA-binding proteins The expanding universe of ribonucleoproteins: of novel RNA-binding proteins and unconventional interactions Tiny giants of gene regulation: experimental strategies for microRNA functional studies Xist localization and function: new insights from multiple levels Seq and CLIP through the miRNA world Evolutionary conservation and expression of human RNA-binding proteins and their role in human genetic disease The "Observer Effect" in genome-wide surveys of protein-RNA interactions Nuclear noncoding RNA surveillance: is the end in sight?The neurogenetics of alternative splicing FMRP targets distinct mRNA sequence elements to regulate protein expression Discovering RNA-protein interactome by using chemical context profiling of the RNA-protein interface RNA-Binding Protein AUF1 Promotes Myogenesis by Regulating MEF2C Expression Levels Computational solutions for omics data.In the right place at the right time: visualizing and understanding mRNA localization.starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data.Sensitive and highly resolved identification of RNA-protein interaction sites in PAR-CLIP data.Assessing Computational Steps for CLIP-Seq Data Analysis.The Human CCHC-type Zinc Finger Nucleic Acid-Binding Protein Binds G-Rich Elements in Target mRNA Coding Sequences and Promotes Translation.Advancing the functional utility of PAR-CLIP by quantifying background binding to mRNAs and lncRNAs RNase-mediated protein footprint sequencing reveals protein-binding sites throughout the human transcriptome Differential protein occupancy profiling of the mRNA transcriptome.Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants.Identification of Interactions between Sindbis Virus Capsid Protein and Cytoplasmic vRNA as Novel Virulence Determinants Identification of the RNA recognition element of the RBPMS family of RNA-binding proteins and their transcriptome-wide mRNA targets Transcriptional and posttranscriptional regulation of cytokine gene expression in HIV-1 antigen-specific CD8+ T cells that mediate virus inhibition.Nascent RNA interaction keeps PRC2 activity poised and in check.Exploiting microRNA regulation for genetic engineering.Multi-disciplinary methods to define RNA-protein interactions and regulatory networks The elongation factor eEF3 (Yef3) interacts with mRNA in a translation independent manner Genome-Wide Profiling of RNA-Protein Interactions Using CLIP-Seq.Virtual interactomics of proteins from biochemical standpoint.Genome-wide approaches to dissect the roles of RNA binding proteins in translational control: implications for neurological diseases The miRNA Interactome in Metabolic Homeostasis RBP-Var: a database of functional variants involved in regulation mediated by RNA-binding proteins.Insight into lncRNA biology using hybridization capture analyses.The RNA-binding profile of Acinus, a peripheral component of the exon junction complex, reveals its role in splicing regulation Emerging roles of small Epstein-Barr virus derived non-coding RNAs in epithelial malignancy.Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression Identifying proteins that bind to specific RNAs - focus on simple repeat expansion diseases.

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P2860

Identification of RNA-protein interaction networks using PAR-CLIP

http://www.wikidata.org/entity/Q27023093

description

2012 nî lūn-bûn

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Identification of RNA-protein interaction networks using PAR-CLIP

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Identification of RNA-protein interaction networks using PAR-CLIP

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Identification of RNA-protein interaction networks using PAR-CLIP

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Identification of RNA-protein interaction networks using PAR-CLIP

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Identification of RNA-protein interaction networks using PAR-CLIP

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Identification of RNA-protein interaction networks using PAR-CLIP

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Identification of RNA-protein interaction networks using PAR-CLIP

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Identification of RNA-protein interaction networks using PAR-CLIP

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Identification of RNA-protein interaction networks using PAR-CLIP

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Wiley interdisciplinary reviews. RNA

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Identification of RNA-protein interaction networks using PAR-CLIP

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Manuel Ascano

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Pavol Cekan

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Stefanie Gerstberger

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P2860

PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny

JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization

Identification and cDNA cloning of a novel RNA-binding protein that interacts with the cyclic nucleotide-responsive sequence in the Type-1 plasminogen activator inhibitor mRNA

Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box

Phosphorylation of HuR by Chk2 regulates SIRT1 expression

Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins

hnRNP G: sequence and characterization of a glycosylated RNA-binding protein

The spinal muscular atrophy disease gene product, SMN, and its associated protein SIP1 are in a complex with spliceosomal snRNP proteins

Identification of a putative RNA helicase (HRH1), a human homolog of yeast Prp22

Mfold web server for nucleic acid folding and hybridization prediction

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10.1002/WRNA.1103

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22213601

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3711140

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