Semantic similarity measures as tools for exploring the gene ontology
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Biomedical discovery acceleration, with applications to craniofacial developmentSemantic similarity in biomedical ontologiesKUPS: constructing datasets of interacting and non-interacting protein pairs with associated attributionsCharacterizing the state of the art in the computational assignment of gene function: lessons from the first critical assessment of functional annotation (CAFA)Finding new genes for non-syndromic hearing loss through an in silico prioritization studyA literature-based similarity metric for biological processes.GOParGenPy: a high throughput method to generate gene ontology data matrices.Assessing the functional coherence of gene sets with metrics based on the Gene Ontology graphBiomedical ontologies in action: role in knowledge management, data integration and decision support.Assessing protein similarity with Gene Ontology and its use in subnuclear localization predictionGOSim--an R-package for computation of information theoretic GO similarities between terms and gene products.Unravelling the hidden heterogeneities of diffuse large B-cell lymphoma based on coupled two-way clusteringDiscovering gene annotations in biomedical text databases.Metrics for GO based protein semantic similarity: a systematic evaluationGene Ontology term overlap as a measure of gene functional similarityA relation based measure of semantic similarity for Gene Ontology annotations.Rapid annotation of anonymous sequences from genome projects using semantic similarities and a weighting scheme in gene ontology.Incorporating functional inter-relationships into protein function prediction algorithmsGene networks in Drosophila melanogaster: integrating experimental data to predict gene functionComputational approaches for detecting protein complexes from protein interaction networks: a survey.UMLS-Interface and UMLS-Similarity : open source software for measuring paths and semantic similarity.Finding the "dark matter" in human and yeast protein network prediction and modellingSPICi: a fast clustering algorithm for large biological networksInformation theory applied to the sparse gene ontology annotation network to predict novel gene functionGO-based functional dissimilarity of gene setsRevealing functionally coherent subsets using a spectral clustering and an information integration approachThe CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolutionManual curation is not sufficient for annotation of genomic databasesppiPre: predicting protein-protein interactions by combining heterogeneous features.How and when should interactome-derived clusters be used to predict functional modules and protein function?System-level insights into the cellular interactome of a non-model organism: inferring, modelling and analysing functional gene network of soybean (Glycine max).Optimal Threshold Determination for Interpreting Semantic Similarity and Particularity: Application to the Comparison of Gene Sets and Metabolic Pathways Using GO and ChEBI.Bi-directional semantic similarity for gene ontology to optimize biological and clinical analyses.The effects of shared information on semantic calculations in the gene ontology.Novel metrics for evaluating the functional coherence of protein groups via protein semantic network.Ontologies for bioinformatics.Relationship between gene co-expression and sharing of transcription factor binding sites in Drosophila melanogaster.OntoQuest: a physician decision support system based on ontological queries of the hospital database.Semantic particularity measure for functional characterization of gene sets using gene ontology.Assessing identity, redundancy and confounds in Gene Ontology annotations over time.
P2860
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P2860
Semantic similarity measures as tools for exploring the gene ontology
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2003 nî lūn-bûn
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2003 թուականին հրատարակուած գիտական յօդուած
@hyw
2003 թվականին հրատարակված գիտական հոդված
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2003年の論文
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2003年論文
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2003年論文
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2003年論文
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2003年論文
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2003年論文
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2003年论文
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name
Semantic similarity measures as tools for exploring the gene ontology
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Semantic similarity measures as tools for exploring the gene ontology
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Semantic similarity measures as tools for exploring the gene ontology
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Semantic similarity measures as tools for exploring the gene ontology
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Semantic similarity measures as tools for exploring the gene ontology
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Semantic similarity measures as tools for exploring the gene ontology
@nl
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Semantic similarity measures as tools for exploring the gene ontology
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Semantic similarity measures as tools for exploring the gene ontology
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Semantic similarity measures as tools for exploring the gene ontology
@nl
P2093
P1476
Semantic similarity measures as tools for exploring the gene ontology
@en
P2093
P304
P407
P50
P577
2003-01-01T00:00:00Z