HOMSTRAD: a database of protein structure alignments for homologous families - Test2 - elhamkhani - TriplyDB

HOMSTRAD: a database of protein structure alignments for homologous families

HOMSTRAD: a database of protein structure alignments for homologous families

http://www.wikidata.org/entity/Q28289717

about

XRate: a fast prototyping, training and annotation tool for phylo-grammars Drosophila neurotrophins reveal a common mechanism for nervous system formation DECIPHER: harnessing local sequence context to improve protein multiple sequence alignment Identification of the fibroblast growth factor (FGF)-interacting domain in a secreted FGF-binding protein by phage display Multiple mutations of MYO1A, a cochlear-expressed gene, in sensorineural hearing loss The Escherichia coli proteome: past, present, and future prospects ProbCons: Probabilistic consistency-based multiple sequence alignment An enhanced RNA alignment benchmark for sequence alignment programs LOMETS: a local meta-threading-server for protein structure prediction Homology-extended sequence alignment EvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environments S4: structure-based sequence alignments of SCOP superfamilies Human glutaminyl cyclase and bacterial zinc aminopeptidase share a common fold and active site PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure information DMAPS: a database of multiple alignments for protein structures M-Coffee: combining multiple sequence alignment methods with T-Coffee The history of the CATH structural classification of protein domains Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega RPAP1, a novel human RNA polymerase II-associated protein affinity purified with recombinant wild-type and mutated polymerase subunits Alignment of distantly related protein structures: algorithm, bound and implications to homology modeling Fast and accurate non-sequential protein structure alignment using a new asymmetric linear sum assignment heuristic Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains Combinatorial clustering of residue position subsets predicts inhibitor affinity across the human kinome Regulation of insulin receptor substrate 1 pleckstrin homology domain by protein kinase C: role of serine 24 phosphorylation Insight into a molecular interaction force supporting peptide backbones and its implication to protein loops and folding Inferring meaningful communities from topology-constrained correlation networks The outer membrane protein LptO is essential for the O-deacylation of LPS and the co-ordinated secretion and attachment of A-LPS and CTD proteins in Porphyromonas gingivalis.Conserved key amino acid positions (CKAAPs) derived from the analysis of common substructures in proteins.CODA: a combined algorithm for predicting the structurally variable regions of protein models.Incorporating knowledge-based biases into an energy-based side-chain modeling method: application to comparative modeling of protein structure.Use of structure comparison methods for the refinement of protein structure predictions. I. Identifying the structural family of a protein from low-resolution models.Sequence-structure homology recognition by iterative alignment refinement and comparative modeling.Automated assignment of SCOP and CATH protein structure classifications from FSSP scores.Functional mapping of conserved, surface-exposed charges of antibody variable domains.Protein structure comparison using bipartite graph matching and its application to protein structure classification.CE-MC: a multiple protein structure alignment server.Multiple flexible structure alignment using partial order graphs.A new progressive-iterative algorithm for multiple structure alignment.Aligning multiple protein structures by deterministic annealing.A network representation of protein structures: implications for protein stability.

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P2860

HOMSTRAD: a database of protein structure alignments for homologous families

http://www.wikidata.org/entity/Q28289717

description

1998 nî lūn-bûn

@nan

1998 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

1998 թվականի նոյեմբերին հրատարակված գիտական հոդված

@hy

1998年の論文

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1998年論文

@yue

1998年論文

@zh-hant

1998年論文

@zh-hk

1998年論文

@zh-mo

1998年論文

@zh-tw

1998年论文

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name

HOMSTRAD: a database of protein structure alignments for homologous families

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HOMSTRAD: a database of protein structure alignments for homologous families

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HOMSTRAD: a database of protein structure alignments for homologous families

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type

label

HOMSTRAD: a database of protein structure alignments for homologous families

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HOMSTRAD: a database of protein structure alignments for homologous families

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HOMSTRAD: a database of protein structure alignments for homologous families

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prefLabel

HOMSTRAD: a database of protein structure alignments for homologous families

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HOMSTRAD: a database of protein structure alignments for homologous families

@en

HOMSTRAD: a database of protein structure alignments for homologous families

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Protein Science

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HOMSTRAD: a database of protein structure alignments for homologous families

@en

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C M Deane

http://www.w3.org/2001/XMLSchema#string

J P Overington

http://www.w3.org/2001/XMLSchema#string

P2860

SCOP: a structural classification of proteins database for the investigation of sequences and structures

The Protein Data Bank: a computer-based archival file for macromolecular structures

CATH--a hierarchic classification of protein domain structures

RASMOL: biomolecular graphics for all

Definition of general topological equivalence in protein structures. A procedure involving comparison of properties and relationships through simulated annealing and dynamic programming.

Derivation of rules for comparative protein modeling from a database of protein structure alignments.

Fragment ranking in modelling of protein structure. Conformationally constrained environmental amino acid substitution tables.

JOY: protein sequence-structure representation and analysis.

A data bank merging related protein structures and sequences.

Alignment and searching for common protein folds using a data bank of structural templates.

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scholarly article

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10.1002/PRO.5560071126

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11

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7

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227650295

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9828015

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protein structure

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2143859

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