The RNA Modification Database, RNAMDB: 2011 update - Test2 - elhamkhani - TriplyDB

The RNA Modification Database, RNAMDB: 2011 update

The RNA Modification Database, RNAMDB: 2011 update

http://www.wikidata.org/entity/Q28298150

about

The rise of regulatory RNA Actin-binding protein ABP140 is a methyltransferase for 3-methylcytidine at position 32 of tRNAs in Saccharomyces cerevisiae ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility Endonuclease V cleaves at inosines in RNA Recognition of RNA duplexes by chemically modified triplex-forming oligonucleotides The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA Who Watches the Watchmen: Roles of RNA Modifications in the RNA Interference Pathway Nucleoside modifications in the regulation of gene expression: focus on tRNA Bioengineering of noncoding RNAs for research agents and therapeutics Codon-biased translation can be regulated by wobble-base tRNA modification systems during cellular stress responses Biosynthesis and functions of sulfur modifications in tRNA RNA mediated Toll-like receptor stimulation in health and disease Structure and function of dioxygenases in histone demethylation and DNA/RNA demethylation Messenger RNA-based vaccines: progress, challenges, applications Conformation Effects of Base Modification on the Anticodon Stem–Loop of Bacillus subtilis tRNATyr Human tRNALys3UUU Is Pre-Structured by Natural Modifications for Cognate and Wobble Codon Binding through Keto–Enol Tautomerism Structure of the bifunctional methyltransferase YcbY (RlmKL) that adds the m7G2069 and m2G2445 modifications in Escherichia coli 23S rRNA Crystal structures of the tRNA:m2G6 methyltransferase Trm14/TrmN from two domains of life Reconstitution and characterization of eukaryotic N6-threonylcarbamoylation of tRNA using a minimal enzyme system S-Adenosyl-S-carboxymethyl-L-homocysteine: a novel cofactor found in the putative tRNA-modifying enzyme CmoA Structural and Mechanistic Basis for Enhanced Translational Efficiency by 2-Thiouridine at the tRNA Anticodon Wobble Position Expanded use of sense codons is regulated by modified cytidines in tRNA The tRNA recognition mechanism of the minimalist SPOUT methyltransferase, TrmL Hydrogen bond formation between the naturally modified nucleobase and phosphate backbone Crystal structure of tRNA m1G9 methyltransferase Trm10: insight into the catalytic mechanism and recognition of tRNA substrate Biochemical and Structural Studies of Conserved Maf Proteins Revealed Nucleotide Pyrophosphatases with a Preference for Modified Nucleotides Structure modulation of helix 69 from Escherichia coli 23S ribosomal RNA by pseudouridylations Identification and Characterization of the Thermus thermophilus 5-Methylcytidine (m5C) Methyltransferase Modifying 23 S Ribosomal RNA (rRNA) Base C1942 Structure of human RNA N6-methyladenine demethylase ALKBH5 provides insights into its mechanisms of nucleic acid recognition and demethylation Crystal structures of the human RNA demethylase Alkbh5 reveal basis for substrate recognition.Structures of Human ALKBH5 Demethylase Reveal a Unique Binding Mode for Specific Single-stranded N 6 -Methyladenosine RNA Demethylation Crystallographic and mutational studies on the tRNA thiouridine synthetase TtuA Structural and functional analyses of the archaeal tRNA m2G/m22G10 methyltransferase aTrm11 provide mechanistic insights into site specificity of a tRNA methyltransferase that contains common RNA-binding modules Molecular basis of cobalamin-dependent RNA modification Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells Genome recoding by tRNA modifications Interactions between the HIV-1 Unspliced mRNA and Host mRNA Decay Machineries tRNA biology in mitochondria A homozygous truncating mutation in PUS3 expands the role of tRNA modification in normal cognition

P2860

Q22121998-BE8141BC-C1F0-42B8-B3E1-8109A853D976 Q24300371-26C4D9AF-8029-4594-A62B-C62EA30AB490 Q24304362-7325E024-9172-4CDE-A6E7-A3D2FE94CB00 Q24314773-D9C4D400-7DA5-418D-BFA1-D343AB304436 Q24599584-530E16EA-855C-4B86-9C4E-12CCAB7D8610 Q24610043-E2000935-96BB-4FA5-987E-2AD373F18D2F Q24611983-8CB179A0-D100-4EB9-ADBE-50765B50EFF7 Q26738586-8B5CE055-1F02-4D6B-9AC0-9B9AD38C482A Q26752314-A8024657-B692-44F8-AF23-BE91BB0B82A4 Q26772092-42543DC9-2F97-42B3-8E53-15126A4CC91D Q26829008-35A615C7-0196-4456-A513-2272E72A5813 Q26851281-75FFE55D-7A38-4B2A-86E1-57B421003C43 Q26999252-E59D7C17-2AB9-4E5E-875A-091E15C821CC Q27012506-2652EFD3-5336-4C33-BD31-325949C1685F Q27012738-781D1D2A-7C9C-4A4B-B335-9B791D11BB8B Q27670963-15EDAF4A-172D-42FA-AF19-98F1A8F60F0E Q27676632-5F8162F1-FA45-4AD3-93C2-AE6F90509D4E Q27677448-BC3DFD7C-642D-4FBD-B7DE-A1AB0FE5C380 Q27677450-2DBA0446-3E37-4379-9C9D-D9DF122ADB82 Q27677604-74F185F4-B58B-41A4-ACCF-67E94E16EAC9 Q27678227-3608A2C9-E62C-45BA-9641-237F64CE6ED7 Q27678443-D8ECBED6-0610-46BA-94BB-4DB9AD2E117A Q27678699-45927C87-EC4A-4130-B7E7-446F29D33775 Q27678816-467FE006-1282-452A-9BF5-2D06C6416BBE Q27679328-F9796363-6ABC-4223-8E3C-0BF44EED2B2F Q27680113-CA02620E-F108-4558-B21A-2B153015A511 Q27680563-D365A37E-54A4-4DB4-A37F-13478688E4B7 Q27681107-5016F7B8-94E3-43EB-9A80-504EDDBB1A24 Q27681233-CEF0DCCB-A06A-4262-961C-8CC13ED05AD0 Q27681567-AC75A869-1648-43D6-B7F3-98AA8CF183C7 Q27682078-28DC547E-D84D-4EF0-A7DF-9EFE6C754559 Q27683584-2D0800E4-382F-4218-A01C-52FF65A60AE7 Q27684090-4DF3952E-B512-4382-B958-1FE2ED5B84E9 Q27712544-D96A63B6-8777-4E28-9461-6A998540A26C Q27728078-8A7170F5-5FD5-4833-A43C-C347644469DC Q27937615-5BD2C89F-022E-4F5E-A54C-F2C58DE6519F Q28070578-0EC15E14-9099-4499-8592-AF5F682D4C5F Q28078564-B08E4732-8543-42AB-9CA2-E45A85B13BAE Q28080757-640387B3-088A-4EB6-9854-6E61A37D2A7A Q28115181-F18A790A-7A0A-4734-B6F1-C3D5C8DCB831

P2860

The RNA Modification Database, RNAMDB: 2011 update

http://www.wikidata.org/entity/Q28298150

description

2011 nî lūn-bûn

@nan

2011 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի հունվարին հրատարակված գիտական հոդված

@hy

2011年の論文

@ja

2011年論文

@yue

2011年論文

@zh-hant

2011年論文

@zh-hk

2011年論文

@zh-mo

2011年論文

@zh-tw

2011年论文

@wuu

name

The RNA Modification Database, RNAMDB: 2011 update

@ast

The RNA Modification Database, RNAMDB: 2011 update

@en

The RNA Modification Database, RNAMDB: 2011 update

@nl

type

label

The RNA Modification Database, RNAMDB: 2011 update

@ast

The RNA Modification Database, RNAMDB: 2011 update

@en

The RNA Modification Database, RNAMDB: 2011 update

@nl

prefLabel

The RNA Modification Database, RNAMDB: 2011 update

@ast

The RNA Modification Database, RNAMDB: 2011 update

@en

The RNA Modification Database, RNAMDB: 2011 update

@nl

P1433

Q28298150-62350BF0-86F2-4982-BC77-7730DCBCDC1D

P1476

Q28298150-D69B9552-2911-4B63-A578-6F3CAB782369

P2093

Q28298150-1738FC7E-42E9-46C5-BCC9-06B84A785D3A

Q28298150-288FFB09-BC92-4EDB-8B39-8E33BA1F767E

Q28298150-79EEB72A-444F-46FC-8454-6F3BCC0BAF8D

Q28298150-C14754E0-677E-4BAB-ACB0-D87D46A603AE

Q28298150-CB5D5B0A-FAB6-4125-B1BD-C36A823285B5

Q28298150-E54323D8-D9C5-4C27-9AE0-545A1CC5B069

Q28298150-F854ADD5-CB11-4236-A1F9-EEEA5AEA3C32

P2860

Q28298150-0A436B2E-4DC3-4722-BC33-D6623746F49C

Q28298150-0BDF3CE4-6A6C-41D0-9DC1-CF10336A9223

Q28298150-0D62B7D6-14FF-4E6E-9AF4-D4BB45AC01B2

Q28298150-0DECA8B3-DD29-46EA-B647-713C48C9AFD6

Q28298150-1134CD38-4613-46C6-971C-ACB30B454F2D

Q28298150-137BDD45-7689-45A2-8C7E-5695573AD9B0

Q28298150-17A12B85-44AD-4A8F-B791-C7621DBA459D

Q28298150-194D4579-6DBA-4619-9307-05A0964A2605

Q28298150-1E0B2B3E-3998-419C-B047-6E27F15CAC5C

Q28298150-2508B218-9863-43FE-A4A9-4528C283A532

P304

Q28298150-E4F694D0-CFB5-4B71-B4D0-CBBF1AA845F7

P31

Q28298150-6D547BD4-DE1C-457F-A49B-C08A6E8B80B9

P3181

Q28298150-F2BD3FDB-11C4-4F5D-9714-F76FCFDE037F

P356

Q28298150-EDD94FCB-1D18-40BA-A249-FE0F5FC934AE

P407

Q28298150-5E54DE8F-42EB-4906-A702-AFAC6B4040C5

P433

Q28298150-7F157C30-34F9-4256-AC92-100646B07C46

P478

Q28298150-E66515DF-5EAD-4638-836B-03D58A7A54A3

P50

Q28298150-389064AA-5C73-416D-B1C1-2872F9CF63C9

Q28298150-5236EE8F-6DBC-486E-87A0-EAE583413701

P577

Q28298150-91225A1C-8C86-459F-B627-11EABEDBF183

P5875

Q28298150-D39CA899-F77E-4E30-90B3-A125BF0BB12E

P698

Q28298150-75A586D5-0603-4EBA-BA6B-0E1365E35554

P921

Q28298150-7A1A2B17-122F-4E8C-84AD-7EFD9C3FBA01

Q28298150-CBB07C01-B2FC-4A5C-89BD-9FECA07E5F45

P932

Q28298150-E96DBA3A-0E67-4EA6-80C4-A880F72E2AD0

P3181

P356

P1433

Nucleic Acids Research

P1476

The RNA Modification Database, RNAMDB: 2011 update

@en

P2093

Daniele Fabris

http://www.w3.org/2001/XMLSchema#string

Franck A P Vendeix

http://www.w3.org/2001/XMLSchema#string

James A McCloskey

http://www.w3.org/2001/XMLSchema#string

Pamela F Crain

http://www.w3.org/2001/XMLSchema#string

Paul F Agris

http://www.w3.org/2001/XMLSchema#string

William A Cantara

http://www.w3.org/2001/XMLSchema#string

Xiaonong Zhang

http://www.w3.org/2001/XMLSchema#string

P2860

Bioinformatics analysis suggests base modifications of tRNAs and miRNAs in Arabidopsis thaliana

Mfold web server for nucleic acid folding and hybridization prediction

Agmatidine, a modified cytidine in the anticodon of archaeal tRNA(Ile), base pairs with adenosine but not with guanosine

Identification of 8-methyladenosine as the modification catalyzed by the radical SAM methyltransferase Cfr that confers antibiotic resistance in bacteria

The methyltransferase YfgB/RlmN is responsible for modification of adenosine 2503 in 23S rRNA

The Small Subunit rRNA Modification Database

The collaboratory for MS3D: a new cyberinfrastructure for the structural elucidation of biological macromolecules and their assemblies using mass spectrometry-based approaches

tRNAdb 2009: compilation of tRNA sequences and tRNA genes

tRNA's wobble decoding of the genome: 40 years of modification

Aptamers with fluorescence-signaling properties.

P304

D195-201

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

1684183

http://www.w3.org/2001/XMLSchema#string

P356

10.1093/NAR/GKQ1028

http://www.w3.org/2001/XMLSchema#string

P407

P433

Database issue

http://www.w3.org/2001/XMLSchema#string

P478

39

http://www.w3.org/2001/XMLSchema#string

P50

Kimberly A Harris

P577

2011-01-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

47755349

http://www.w3.org/2001/XMLSchema#string

P698

21071406

http://www.w3.org/2001/XMLSchema#string

P921

P932

3013656

http://www.w3.org/2001/XMLSchema#string