about
Modeling large regions in proteins: applications to loops, termini, and foldingThree-dimensional structures of membrane proteins from genomic sequencingInnovations in proteomic profiling of cancers: alternative splice variants as a new class of cancer biomarker candidates and bridging of proteomics with structural biologyCrystal structure of a monomeric retroviral protease solved by protein folding game players.Constraint methods that accelerate free-energy simulations of biomoleculesOn docking, scoring and assessing protein-DNA complexes in a rigid-body frameworkInsertion of the Ca²⁺-independent phospholipase A₂ into a phospholipid bilayer via coarse-grained and atomistic molecular dynamics simulationsFlexible backbone sampling methods to model and design protein alternative conformationsCritical assessment of methods of protein structure prediction (CASP)--round IXMembrane protein orientation and refinement using a knowledge-based statistical potential.i3Drefine software for protein 3D structure refinement and its assessment in CASP10Evaluation of predictions in the CASP10 model refinement category.lDDT: a local superposition-free score for comparing protein structures and models using distance difference tests.Protein modeling: what happened to the "protein structure gap"?Princeton_TIGRESS: protein geometry refinement using simulations and support vector machines.Modelling three-dimensional protein structures for applications in drug design.Protein folding and de novo protein design for biotechnological applicationsProtein structure refinement of CASP target proteins using GNEIMO torsional dynamics methodEnsemble MD simulations restrained via crystallographic data: accurate structure leads to accurate dynamicsWeFold: a coopetition for protein structure predictionEvaluation of unrestrained replica-exchange simulations using dynamic walkers in temperature space for protein structure refinement.Internal coordinate molecular dynamics: a foundation for multiscale dynamicsFlexE: Using elastic network models to compare models of protein structure.CASP11 refinement experiments with ROSETTA.Protein structure refinement via molecular-dynamics simulations: What works and what does not?Protein structure refinement with adaptively restrained homologous replicas.Assessment of refinement of template-based models in CASP11.FF12MC: A revised AMBER forcefield and new protein simulation protocol.Blind protein structure prediction using accelerated free-energy simulationsDetermining protein similarity by comparing hydrophobic core structure.Princeton_TIGRESS 2.0: High refinement consistency and net gains through support vector machines and molecular dynamics in double-blind predictions during the CASP11 experiment.Refinement of protein structure homology models via long, all-atom molecular dynamics simulations.The MULTICOM toolbox for protein structure predictionKoBaMIN: a knowledge-based minimization web server for protein structure refinement.Elastic network normal modes provide a basis for protein structure refinementGalaxyWEB server for protein structure prediction and refinement.3Drefine: consistent protein structure refinement by optimizing hydrogen bonding network and atomic-level energy minimization.CAD-score: a new contact area difference-based function for evaluation of protein structural models.Protein Structure Refinement through Structure Selection and Averaging from Molecular Dynamics Ensembles.Physics-based protein structure refinement through multiple molecular dynamics trajectories and structure averaging.
P2860
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P2860
description
2011 nî lūn-bûn
@nan
2011 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Assessment of protein structure refinement in CASP9.
@ast
Assessment of protein structure refinement in CASP9.
@en
type
label
Assessment of protein structure refinement in CASP9.
@ast
Assessment of protein structure refinement in CASP9.
@en
prefLabel
Assessment of protein structure refinement in CASP9.
@ast
Assessment of protein structure refinement in CASP9.
@en
P2093
P2860
P356
P1433
P1476
Assessment of protein structure refinement in CASP9
@en
P2093
Justin L MacCallum
Ken A Dill
Michael J Schnieders
P2860
P356
10.1002/PROT.23131
P407
P478
79 Suppl 10
P577
2011-08-30T00:00:00Z