Nontarget DNA binding shapes the dynamic landscape for enzymatic recognition of DNA damage. - Test2 - elhamkhani - TriplyDB

Nontarget DNA binding shapes the dynamic landscape for enzymatic recognition of DNA damage.

Nontarget DNA binding shapes the dynamic landscape for enzymatic recognition of DNA damage.

http://www.wikidata.org/entity/Q30488332

about

DNA glycosylases: in DNA repair and beyond Architecturally diverse proteins converge on an analogous mechanism to inactivate Uracil-DNA glycosylase Twist-open mechanism of DNA damage recognition by the Rad4/XPC nucleotide excision repair complex Uracil-DNA glycosylase: Structural, thermodynamic and kinetic aspects of lesion search and recognition Characterization of DNA with an 8-oxoguanine modification.Lesion search and recognition by thymine DNA glycosylase revealed by single molecule imaging.Frustration in protein-DNA binding influences conformational switching and target search kinetics.Molecular crowding enhances facilitated diffusion of two human DNA glycosylases Combining H/D exchange mass spectroscopy and computational docking reveals extended DNA-binding surface on uracil-DNA glycosylase.DNA translocation by human uracil DNA glycosylase: role of DNA phosphate charge.DNA translocation by human uracil DNA glycosylase: the case of single-stranded DNA and clustered uracils.Regulation of DNA glycosylases and their role in limiting disease.Detection of damaged DNA bases by DNA glycosylase enzymes.Recognition of damaged DNA: structure and dynamic markers.Cosolute paramagnetic relaxation enhancements detect transient conformations of human uracil DNA glycosylase (hUNG).Timing facilitated site transfer of an enzyme on DNA Unique dynamic properties of DNA duplexes containing interstrand cross-links.Enzymatic excision of uracil residues in nucleosomes depends on the local DNA structure and dynamics.Measurement of nanoscale DNA translocation by uracil DNA glycosylase in human cells.Enhanced spontaneous DNA twisting/bending fluctuations unveiled by fluorescence lifetime distributions promote mismatch recognition by the Rad4 nucleotide excision repair complex.Two-step interrogation then recognition of DNA binding site by Integration Host Factor: an architectural DNA-bending protein.Single-particle trajectories reveal two-state diffusion-kinetics of hOGG1 proteins on DNA.Structural Insights into c-Myc-interacting Zinc Finger Protein-1 (Miz-1) Delineate Domains Required for DNA Scanning and Sequence-specific Binding.A structurally conserved motif in γ-herpesvirus uracil-DNA glycosylases elicits duplex nucleotide-flipping.Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation

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P2860

Nontarget DNA binding shapes the dynamic landscape for enzymatic recognition of DNA damage.

http://www.wikidata.org/entity/Q30488332

description

2009 nî lūn-bûn

@nan

2009 թուականի Ապրիլին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի ապրիլին հրատարակված գիտական հոդված

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2009年の論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年论文

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Nontarget DNA binding shapes t ...... tic recognition of DNA damage.

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Nontarget DNA binding shapes t ...... tic recognition of DNA damage.

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Nontarget DNA binding shapes t ...... tic recognition of DNA damage.

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Nontarget DNA binding shapes t ...... tic recognition of DNA damage.

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Nontarget DNA binding shapes t ...... tic recognition of DNA damage.

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Nucleic Acids Research

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Nontarget DNA binding shapes t ...... tic recognition of DNA damage.

@en

P2093

Ananya Majumdar

http://www.w3.org/2001/XMLSchema#string

James T Stivers

http://www.w3.org/2001/XMLSchema#string

Joshua I Friedman

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P2860

Uracil-DNA glycosylase-DNA substrate and product structures: conformational strain promotes catalytic efficiency by coupled stereoelectronic effects

NMR chemical shift and relaxation measurements provide evidence for the coupled folding and binding of the p53 transactivation domain

Solution-state NMR investigations of triosephosphate isomerase active site loop motion: ligand release in relation to active site loop dynamics

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

Crystal structure and mutational analysis of human uracil-DNA glycosylase: structural basis for specificity and catalysis

Intrinsic dynamics of an enzyme underlies catalysis

ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement

Dynamic opening of DNA during the enzymatic search for a damaged base.

Kinetic mechanism of damage site recognition and uracil flipping by Escherichia coli uracil DNA glycosylase.

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3493-3500

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10.1093/NAR/GKP161

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11

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37

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2009-04-01T00:00:00Z

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