Large-scale quality analysis of published ChIP-seq data.
about
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.Identifying peaks in *-seq data using shape information.ChIP-seq Data Processing for PcG Proteins and Associated Histone Modifications.Retrieving Chromatin Patterns from Deep Sequencing Data Using Correlation Functions.HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models.Optimization of transcription factor binding map accuracy utilizing knockout-mouse models.Dynamics of GATA1 binding and expression response in a GATA1-induced erythroid differentiation systemIntegrative analysis of public ChIP-seq experiments reveals a complex multi-cell regulatory landscape.Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways.Common binding by redundant group B Sox proteins is evolutionarily conserved in Drosophila.Calibrating ChIP-Seq with Nucleosomal Internal Standards to Measure Histone Modification Density Genome Wide.A Study of Alterations in DNA Epigenetic Modifications (5mC and 5hmC) and Gene Expression Influenced by Simulated Microgravity in Human Lymphoblastoid Cells.An interactive environment for agile analysis and visualization of ChIP-sequencing data.Genome-wide epigenetic profiling of breast cancer tumors treated with aromatase inhibitors.Assessing quality standards for ChIP-seq and related massive parallel sequencing-generated datasets: When rating goes beyond avoiding the crisis.CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid CellsChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline.TEAD transcription factors are required for normal primary myoblast differentiation in vitro and muscle regeneration in vivoIdentification of Candidate Functional Elements in the Genome from ChIP-seq Data.Integration of Genome-Wide TF Binding and Gene Expression Data to Characterize Gene Regulatory Networks in Plant Development.Genome-Wide Epigenetic Studies in Human Disease: A Primer on -Omic TechnologiesChIP bias as a function of cross-linking timeIdentifying and mitigating bias in next-generation sequencing methods for chromatin biology.Recent advances in ChIP-seq analysis: from quality management to whole-genome annotation.Epigenetics and Control of RNAs.Fully automated high-throughput chromatin immunoprecipitation for ChIP-seq: identifying ChIP-quality p300 monoclonal antibodies.Transcriptional regulation of human and murine short-chain dehydrogenase/reductases (SDRs) - an in silico approach.Data exploration, quality control and statistical analysis of ChIP-exo/nexus experiments.Characterization of the direct targets of FOXO transcription factors throughout evolution.Targeted chromatin ligation, a robust epigenetic profiling technique for small cell numbers.Brd4 binds to active enhancers to control cell identity gene induction in adipogenesis and myogenesis.ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments.Gene-specific mechanisms direct Glucocorticoid Receptor-driven repression of inflammatory response genes in macrophages.Reproducibility and replicability of rodent phenotyping in preclinical studiesChIP-seq for the Identification of Functional Elements in the Human Genome.Distinct Roles of Brd2 and Brd4 in Potentiating the Transcriptional Program for Th17 Cell Differentiation.CTCF maintains regulatory homeostasis of cancer pathways: A Tool for Searching Putative Factors Regulating Gene Expression Using ChIP-seq Data
P2860
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P2860
Large-scale quality analysis of published ChIP-seq data.
description
2014 nî lūn-bûn
@nan
2014 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2014 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2014年の論文
@ja
2014年論文
@yue
2014年論文
@zh-hant
2014年論文
@zh-hk
2014年論文
@zh-mo
2014年論文
@zh-tw
2014年论文
@wuu
name
Large-scale quality analysis of published ChIP-seq data.
@ast
Large-scale quality analysis of published ChIP-seq data.
@en
type
label
Large-scale quality analysis of published ChIP-seq data.
@ast
Large-scale quality analysis of published ChIP-seq data.
@en
prefLabel
Large-scale quality analysis of published ChIP-seq data.
@ast
Large-scale quality analysis of published ChIP-seq data.
@en
P2093
P2860
P356
P1433
P1476
Large-scale quality analysis of published ChIP-seq data.
@en
P2093
Barbara J Wold
Georgi K Marinov
Peter J Park
P2860
P304
P356
10.1534/G3.113.008680
P577
2014-02-19T00:00:00Z