Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs - Test2 - elhamkhani - TriplyDB

Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

http://www.wikidata.org/entity/Q33242821

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The Long Non-Coding RNAs: A New (P)layer in the "Dark Matter"Molecular evolution of the non-coding eosinophil granule ontogeny transcript Intragenomic matching reveals a huge potential for miRNA-mediated regulation in plants Identification of the gene encoding alkylglycerol monooxygenase defines a third class of tetrahydrobiopterin-dependent enzymes The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression The landscape of histone modifications across 1% of the human genome in five human cell lines Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs Linking RNA biology to lncRNAs Bioinformatics tools and novel challenges in long non-coding RNAs (lncRNAs) functional analysis Long non-coding RNA-dependent transcriptional regulation in neuronal development and disease Transcriptome complexity in cardiac development and diseases--an expanding universe between genome and phenome A critical assessment of Mus musculus gene function prediction using integrated genomic evidence.Long Noncoding RNAs: A New Regulatory Code in Metabolic Control Transcriptome-based systematic identification of extracellular matrix proteins Computational Identification of the Paralogs and Orthologs of Human Cytochrome P450 Superfamily and the Implication in Drug Discovery RNAcentral: A vision for an international database of RNA sequences Genome Network and FANTOM3: assessing the complexity of the transcriptome Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyond Exploring the "dark matter" of a mammalian proteome by protein structure and function modeling.A Regression-Based Analysis of Ribosome-Profiling Data Reveals a Conserved Complexity to Mammalian Translation The abundance of short proteins in the mammalian proteome.Exploring nervous system transcriptomes during embryogenesis and metamorphosis in Xenopus tropicalis using EST analysis Computational analyses of eukaryotic promoters EuCAP, a Eukaryotic Community Annotation Package, and its application to the rice genome.Exonization of active mouse L1s: a driver of transcriptome evolution?Alternative promoters influence alternative splicing at the genomic level.Mining mammalian transcript data for functional long non-coding RNAs.Representing ontogeny through ontology: a developmental biologist's guide to the gene ontology Regulated post-transcriptional RNA cleavage diversifies the eukaryotic transcriptome.Genome-wide discovery and characterization of maize long non-coding RNAs.Genomics and bioinformatics resources for crop improvement.Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways.Methods for the study of long noncoding RNA in cancer cell signaling.Epigenetic coordination of embryonic heart transcription by dynamically regulated long noncoding RNAs LncRBase: an enriched resource for lncRNA information.Bidirectional regulation between WDR83 and its natural antisense transcript DHPS in gastric cancer.Helper T cell plasticity: impact of extrinsic and intrinsic signals on transcriptomes and epigenomes.Regulation of neural macroRNAs by the transcriptional repressor REST.Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network.Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources.

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P2860

Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

http://www.wikidata.org/entity/Q33242821

description

2006 nî lūn-bûn

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2006 թուականի Ապրիլին հրատարակուած գիտական յօդուած

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2006 թվականի ապրիլին հրատարակված գիտական հոդված

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2006年の論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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2006年论文

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Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

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Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

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Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

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Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

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Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

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Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

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JOURNAL.PGEN.0020062

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Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

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Alistair R R Forrest

http://www.w3.org/2001/XMLSchema#string

Brian Z Ring

http://www.w3.org/2001/XMLSchema#string

Carol J Bult

http://www.w3.org/2001/XMLSchema#string

Chikatoshi Kai

http://www.w3.org/2001/XMLSchema#string

Colin F Fletcher

http://www.w3.org/2001/XMLSchema#string

David Hill

http://www.w3.org/2001/XMLSchema#string

Jun Kawai

http://www.w3.org/2001/XMLSchema#string

Kazuhiro Shibata

http://www.w3.org/2001/XMLSchema#string

Kirk W Beisel

http://www.w3.org/2001/XMLSchema#string

Koji Sugiura

http://www.w3.org/2001/XMLSchema#string

P2860

The Universal Protein Resource (UniProt)

The generic genome browser: a building block for a model organism system database

BLAT--the BLAST-like alignment tool

RNAdb--a comprehensive mammalian noncoding RNA database

CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis.

Basic local alignment search tool

EMBOSS: the European Molecular Biology Open Software Suite

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

The transcriptional landscape of the mammalian genome

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

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e62

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scholarly article

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10.1371/JOURNAL.PGEN.0020062

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4

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2

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Yoshihide Hayashizaki

Pär G Engström

Shintaro Katayama

Takeya Kasukawa

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2006-04-01T00:00:00Z

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7098218

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16683036

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1449903

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