Adaptation to different human populations by HIV-1 revealed by codon-based analyses - Test2 - elhamkhani - TriplyDB

Adaptation to different human populations by HIV-1 revealed by codon-based analyses

Adaptation to different human populations by HIV-1 revealed by codon-based analyses

http://www.wikidata.org/entity/Q33247450

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The evolution of amastin surface glycoproteins in trypanosomatid parasites Evolutionary Analyses and Natural Selection of Betaine-Homocysteine S-Methyltransferase (BHMT) and BHMT2 Genes Analysis of genotype diversity and evolution of Dengue virus serotype 2 using complete genomes Adaptation to Human Populations Is Revealed by Within-Host Polymorphisms in HIV-1 and Hepatitis C Virus Genetic Characterization of Hepatitis B Virus in Peripheral Blood Leukocytes: Evidence for Selection and Compartmentalization of Viral Variants with the Immune Escape G145R Mutation HLA-driven convergence of HIV-1 viral subtypes B and F toward the adaptation to immune responses in human populations Evolutionary modeling of rate shifts reveals specificity determinants in HIV-1 subtypes Modeling HIV-1 drug resistance as episodic directional selection Population structure and evolution of Rhinoviruses Coordinated Evolution of Influenza A Surface Proteins Purifying selection can obscure the ancient age of viral lineages Do relaxed selection and habitat temperature facilitate biased mitogenomic introgression in a narrowly endemic fish?Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology Genomewide analysis of reassortment and evolution of human influenza A(H3N2) viruses circulating between 1968 and 2011 Differential selection in HIV-1 gp120 between subtype B and East Asian variant B'.The emergence and evolution of the novel epidemic norovirus GII.4 variant Sydney 2012.Evolution of the M gene of the influenza A virus in different host species: large-scale sequence analysis.Large-scale sequence analysis of M gene of influenza A viruses from different species: mechanisms for emergence and spread of amantadine resistance.Evolutionary fingerprinting of genes.Evolution and adaptation of hemagglutinin gene of human H5N1 influenza virus.Reconstruction of the evolutionary dynamics of the A(H1N1)pdm09 influenza virus in Italy during the pandemic and post-pandemic phases Detection of site-specific positive Darwinian selection on pandemic influenza A/H1N1 virus genome: integrative approaches.Conserved positive selection signals in gp41 across multiple subtypes and difference in selection signals detectable in gp41 sequences sampled during acute and chronic HIV-1 subtype C infection.Phylogeography and molecular epidemiology of an epidemic strain of dengue virus type 1 in Sri Lanka Modelling the evolution and spread of HIV immune escape mutants Genetic diversity and selection in three Plasmodium vivax merozoite surface protein 7 (Pvmsp-7) genes in a Colombian population.Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics HIV-specific probabilistic models of protein evolution MHC adaptive divergence between closely related and sympatric African cichlids Frequent toggling between alternative amino acids is driven by selection in HIV-1 Microevolutionary dynamics of a macroevolutionary key innovation in a Lepidopteran herbivore Phylodynamic reconstruction reveals norovirus GII.4 epidemic expansions and their molecular determinants.The herpevac trial for women: Sequence analysis of glycoproteins from viruses obtained from infected subjects.HLA-associated immune pressure on Gag protein in CRF01_AE-infected individuals and its association with plasma viral load.Genome wide analysis of the evolution of Senecavirus A from swine clinical material and assembly yard environmental samples.Evolutionary and structural features of the C2, V3 and C3 envelope regions underlying the differences in HIV-1 and HIV-2 biology and infection.Differential strengths of selection on S-RNases from Physalis and Solanum (Solanaceae)Differential trends in the codon usage patterns in HIV-1 genes Comparison of genotypes I and III in Japanese encephalitis virus reveals distinct differences in their genetic and host diversity.Phylogeography and molecular evolution of potato virus Y.

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Adaptation to different human populations by HIV-1 revealed by codon-based analyses

http://www.wikidata.org/entity/Q33247450

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2006 nî lūn-bûn

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2006 թուականի Յունիսին հրատարակուած գիտական յօդուած

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2006 թվականի հունիսին հրատարակված գիտական հոդված

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2006年の論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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2006年论文

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name

Adaptation to different human populations by HIV-1 revealed by codon-based analyses

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Adaptation to different human populations by HIV-1 revealed by codon-based analyses

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type

label

Adaptation to different human populations by HIV-1 revealed by codon-based analyses

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Adaptation to different human populations by HIV-1 revealed by codon-based analyses

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prefLabel

Adaptation to different human populations by HIV-1 revealed by codon-based analyses

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Adaptation to different human populations by HIV-1 revealed by codon-based analyses

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JOURNAL.PCBI.0020062

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PLOS Computational Biology

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Adaptation to different human populations by HIV-1 revealed by codon-based analyses

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Andrew J Leigh Brown

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Douglas D Richman

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Michael B Gravenor

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Zehava Grossman

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P2860

The origins of acquired immune deficiency syndrome viruses: where and when?

Inefficient cytotoxic T lymphocyte-mediated killing of HIV-1-infected cells in vivo

The neighbor-joining method: a new method for reconstructing phylogenetic trees

Genealogical evidence for positive selection in the nef gene of HIV-1

Codon-substitution models for heterogeneous selection pressure at amino acid sites

New Methods for Detecting Positive Selection at Single Amino Acid Sites

Divergent and convergent evolution after a common-source outbreak of hepatitis C virus

Patterns of Intra- and Interhost Nonsynonymous Variation Reveal Strong Purifying Selection in Dengue Virus

MRBAYES: Bayesian inference of phylogenetic trees

Evolutionary trees from DNA sequences: a maximum likelihood approach

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10.1371/JOURNAL.PCBI.0020062

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