Sequence features responsible for intron retention in human. - Test2 - elhamkhani - TriplyDB

Sequence features responsible for intron retention in human.

Sequence features responsible for intron retention in human.

http://www.wikidata.org/entity/Q33275628

about

Splicing regulation: from a parts list of regulatory elements to an integrated splicing code Cross-kingdom patterns of alternative splicing and splice recognition Regulation of PERK signaling and leukemic cell survival by a novel cytosolic isoform of the UPR regulator GRP78/BiP The sld genetic defect: two intronic CA repeats promote insertion of the subsequent intron and mRNA decay Widespread intron retention in mammals functionally tunes transcriptomes Association of intronic sequence variant in the gene encoding spleen tyrosine kinase with susceptibility to vascular dementia Exon definition as a potential negative force against intron losses in evolution.Computational analysis of splicing errors and mutations in human transcripts.Regulation of expression of two LY-6 family genes by intron retention and transcription induced chimerism.Width of gene expression profile drives alternative splicing.Evolution of splicing regulatory networks in Drosophila Hypoxia is a Key Driver of Alternative Splicing in Human Breast Cancer Cells.Genome-wide survey of Alternative Splicing in Sorghum Bicolor.Hormonal regulation of cardiac KCNE2 gene expression.Increased complexity of Tmem16a/Anoctamin 1 transcript alternative splicing A novel human ghrelin variant (In1-ghrelin) and ghrelin-O-acyltransferase are overexpressed in breast cancer: potential pathophysiological relevance.Comparative analyses between retained introns and constitutively spliced introns in Arabidopsis thaliana using random forest and support vector machine.Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis.Mutation of a U2 snRNA gene causes global disruption of alternative splicing and neurodegeneration Expression of ribosomal protein L22e family members in Drosophila melanogaster: rpL22-like is differentially expressed and alternatively spliced The global landscape of intron retentions in lung adenocarcinoma.A splice mutation and mRNA decay of EXT2 provoke hereditary multiple exostoses.Mechanism of alternative splicing and its regulation BS69/ZMYND11 reads and connects histone H3.3 lysine 36 trimethylation-decorated chromatin to regulated pre-mRNA processing Key features of the two-intron Saccharomyces cerevisiae gene SUS1 contribute to its alternative splicing.Regulation of toll-like receptor signaling by the SF3a mRNA splicing complex.The CYP2C19 Intron 2 Branch Point SNP is the Ancestral Polymorphism Contributing to the Poor Metabolizer Phenotype in Livers with CYP2C19*35 and CYP2C19*2 Alleles.Factors Affecting the Radiosensitivity of Hexaploid Wheat to γ-Irradiation: Radiosensitivity of Hexaploid Wheat (Triticum aestivum L.) [Corrected].SPLOOCE: a new portal for the analysis of human splicing variants.Intron retention and rhythmic diel pattern regulation of carotenoid cleavage dioxygenase 2 during crocetin biosynthesis in saffron Alternative splicing acting as a bridge in evolution.Identification of myo-inositol-3-phosphate synthase isoforms: characterization, expression, and putative role of a 16-kDa gamma(c) isoform.Lessons from non-canonical splicing Identification of Alternative Variants and Insertion of the Novel Polymorphic AluYl17 in TSEN54 Gene during Primate Evolution.LOX-1 and Its Splice Variants: A New Challenge for Atherosclerosis and Cancer-Targeted Therapies.ARTS, the unusual septin: structural and functional aspects.The functional consequences of intron retention: alternative splicing coupled to NMD as a regulator of gene expression.Regulation of gene expression through production of unstable mRNA isoforms.Alternative splicing mechanisms orchestrating post-transcriptional gene expression: intron retention and the intron-rich genome of apicomplexan parasites.Intron retention in mRNA: No longer nonsense: Known and putative roles of intron retention in normal and disease biology.

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P2860

Sequence features responsible for intron retention in human.

http://www.wikidata.org/entity/Q33275628

description

2007 nî lūn-bûn

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2007 թուականի Փետրուարին հրատարակուած գիտական յօդուած

@hyw

2007 թվականի փետրվարին հրատարակված գիտական հոդված

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2007年の論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年论文

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name

Sequence features responsible for intron retention in human.

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Sequence features responsible for intron retention in human.

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type

label

Sequence features responsible for intron retention in human.

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Sequence features responsible for intron retention in human.

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prefLabel

Sequence features responsible for intron retention in human.

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Sequence features responsible for intron retention in human.

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Sequence features responsible for intron retention in human.

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Noboru Jo Sakabe

http://www.w3.org/2001/XMLSchema#string

Sandro José de Souza

http://www.w3.org/2001/XMLSchema#string

P2860

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Order of intron removal influences multiple splice outcomes, including a two-exon skip, in a COL5A1 acceptor-site mutation that results in abnormal pro-alpha1(V) N-propeptides and Ehlers-Danlos syndrome type I

RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression

General and specific functions of exonic splicing silencers in splicing control

Recognition of unknown conserved alternatively spliced exons.

The Tgif2 gene contains a retained intron within the coding sequence.

EMBOSS: the European Molecular Biology Open Software Suite

WebLogo: A Sequence Logo Generator

Serial analysis of gene expression

The UCSC Genome Browser Database

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scholarly article

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10.1186/1471-2164-8-59

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8

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