Functional specificity lies within the properties and evolutionary changes of amino acids - Test2 - elhamkhani - TriplyDB

Functional specificity lies within the properties and evolutionary changes of amino acids

Functional specificity lies within the properties and evolutionary changes of amino acids

http://www.wikidata.org/entity/Q33299043

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Phylogenetic-Derived Insights into the Evolution of Sialylation in Eukaryotes: Comprehensive Analysis of Vertebrate β-Galactoside α2,3/6-Sialyltransferases (ST3Gal and ST6Gal)Predicting protein ligand binding sites by combining evolutionary sequence conservation and 3D structure Employing information theoretic measures and mutagenesis to identify residues critical for drug-proton antiport function in Mdr1p of Candida albicans Crystal Structure of the Escherichia coli Fic Toxin-Like Protein in Complex with Its Cognate Antitoxin Amino acid positions subject to multiple coevolutionary constraints can be robustly identified by their eigenvector network centrality scores Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes.Combining specificity determining and conserved residues improves functional site prediction Coevolution in defining the functional specificity.Computing highly correlated positions using mutual information and graph theory for G protein-coupled receptors.Ensemble approach to predict specificity determinants: benchmarking and validation Comparing the functional roles of nonconserved sequence positions in homologous transcription repressors: implications for sequence/function analyses.An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies.Massive expansion and differential evolution of small heat shock proteins with wheat (Triticum aestivum L.) polyploidization.New methods to measure residues coevolution in proteins.Evolution: a guide to perturb protein function and networks Automated hierarchical classification of protein domain subfamilies based on functionally-divergent residue signatures Diversity of benzylsuccinate synthase-like (bssA) genes in hydrocarbon-polluted marine sediments suggests substrate-dependent clustering.Cube - an online tool for comparison and contrasting of protein sequences.Surveying the manifold divergence of an entire protein class for statistical clues to underlying biochemical mechanisms.SPEER-SERVER: a web server for prediction of protein specificity determining sites.High-Resolution Identification of Specificity Determining Positions in the LacI Protein Family Using Ensembles of Sub-Sampled Alignments.SigniSite: Identification of residue-level genotype-phenotype correlations in protein multiple sequence alignments Experimental identification of specificity determinants in the domain linker of a LacI/GalR protein: bioinformatics-based predictions generate true positives and false negatives.SDR: a database of predicted specificity-determining residues in proteins Cyclic di-GMP mediates a histidine kinase/phosphatase switch by noncovalent domain cross-linking A survey on prediction of specificity-determining sites in proteins.Cube-DB: detection of functional divergence in human protein families Identification of family-determining residues in PHD fingers.Characterization and prediction of residues determining protein functional specificity.Identification of subfamily-specific sites based on active sites modeling and clustering.Bioinformatic analysis of protein families for identification of variable amino acid residues responsible for functional diversity.Two-domain analysis of JmjN-JmjC and PHD-JmjC lysine demethylases: Detecting an inter-domain evolutionary stress.An update of DIVERGE software for functional divergence analysis of protein family.An analysis approach to identify specific functional sites in orthologous proteins using sequence and structural information: application to neuroserpin reveals regions that differentially regulate inhibitory activity.Recognition of sites of functional specialisation in all known eukaryotic protein kinase families.Molecular Evolution and Functional Divergence of the IgLON Family.

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P2860

Functional specificity lies within the properties and evolutionary changes of amino acids

http://www.wikidata.org/entity/Q33299043

description

2007 nî lūn-bûn

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2007 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

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2007 թվականի օգոստոսին հրատարակված գիտական հոդված

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2007年の論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年论文

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Functional specificity lies within the properties and evolutionary changes of amino acids

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Functional specificity lies within the properties and evolutionary changes of amino acids

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Functional specificity lies wi ...... ionary changes of amino acids.

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Functional specificity lies within the properties and evolutionary changes of amino acids

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Functional specificity lies within the properties and evolutionary changes of amino acids

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Functional specificity lies wi ...... ionary changes of amino acids.

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Functional specificity lies within the properties and evolutionary changes of amino acids

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Functional specificity lies within the properties and evolutionary changes of amino acids

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Functional specificity lies wi ...... ionary changes of amino acids.

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J.JMB.2007.08.036

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Journal of Molecular Biology

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Functional specificity lies within the properties and evolutionary changes of amino acids

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P2093

Anna R Panchenko

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Saikat Chakrabarti

http://www.w3.org/2001/XMLSchema#string

Stephen H Bryant

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P2860

Predicting specificity-determining residues in two large eukaryotic transcription factor families

Structure-based identification of a novel NTPase from Methanococcus jannaschii

Functional implications from crystal structures of the conserved Bacillus subtilis protein Maf with and without dUTP

Structure and function of the dihydropteroate synthase from Staphylococcus aureus

Crystal structure of the anti-bacterial sulfonamide drug target dihydropteroate synthase

The 'evolvability' of promiscuous protein functions

An interactive visualization tool to explore the biophysical properties of amino acids and their contribution to substitution matrices

Database of homology-derived protein structures and the structural meaning of sequence alignment

Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements

Evolutionarily conserved pathways of energetic connectivity in protein families

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801-810

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scholarly article

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10.1016/J.JMB.2007.08.036

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3

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2007-08-22T00:00:00Z

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17868687

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2605514

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