HMMSplicer: a tool for efficient and sensitive discovery of known and novel splice junctions in RNA-Seq data
about
A draft genome of the honey bee trypanosomatid parasite Crithidia mellificaeInteraction of cyclin-dependent kinase 12/CrkRS with cyclin K1 is required for the phosphorylation of the C-terminal domain of RNA polymerase IIRNA-seq analyses of blood-induced changes in gene expression in the mosquito vector species, Aedes aegyptiSurvey of Programs Used to Detect Alternative Splicing Isoforms from Deep Sequencing Data In SilicoRibosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogasterStrand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparumComparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM).PASSion: a pattern growth algorithm-based pipeline for splice junction detection in paired-end RNA-Seq data.Overview of available methods for diverse RNA-Seq data analyses.SOAPsplice: Genome-Wide ab initio Detection of Splice Junctions from RNA-Seq DataRNA-Seq analysis of splicing in Plasmodium falciparum uncovers new splice junctions, alternative splicing and splicing of antisense transcriptsAltered gamma-aminobutyric acid type B receptor subunit 1 splicing in alcoholics.Long non-coding RNA and alternative splicing modulations in Parkinson's leukocytes identified by RNA sequencing.SpliceDisease database: linking RNA splicing and diseaseGenomics and integrated systems biology in Plasmodium falciparum: a path to malaria control and eradication.Revealing Missing Human Protein Isoforms Based on Ab Initio Prediction, RNA-seq and ProteomicsSplicePie: a novel analytical approach for the detection of alternative, non-sequential and recursive splicing.RNASEQR--a streamlined and accurate RNA-seq sequence analysis programComparative evaluation of intron prediction methods and detection of plant genome annotation using intron length distributions.Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica.TrueSight: a new algorithm for splice junction detection using RNA-seq.Review: Alternative Splicing (AS) of Genes As An Approach for Generating Protein Complexity.KSHV 2.0: a comprehensive annotation of the Kaposi's sarcoma-associated herpesvirus genome using next-generation sequencing reveals novel genomic and functional features.An introduction to the informatics of "next-generation" sequencing.Computational approaches to discovering noncoding RNA.Undiscovered Physiology of Transcript and Protein Networks.A mutually exclusive stem-loop arrangement in roX2 RNA is essential for X-chromosome regulation in Drosophila.
P2860
Q21132059-AE88F8C9-DA00-4F2A-8C3C-DEA060EB5CEAQ24299038-D114B3BA-AF99-476E-9118-500147B03D95Q24617913-636F2859-AA2F-43AC-8565-2C03961D5B60Q26784053-3AFF0705-BC3C-4F91-B552-818A6921981CQ28661445-134F0A02-F75A-4A5E-9308-973EDE3FC17FQ33558324-6058889D-6AF1-46B5-B722-431F02349DE4Q33966703-7BE7BF13-7CD9-44D6-B3F3-E13D41AE7698Q34118889-089DD20C-EE4A-46C9-B7E5-8C87EB58606CQ34121449-5E4B0B6C-0126-41FF-9E93-E9D3F6CA2485Q34149919-22BD15FA-888E-48A8-A77D-9CDD7453B494Q34946799-02D46891-9205-44BB-B043-543ECC2C6D82Q35037624-E67A5FC6-AA6B-420E-9939-20430B9EC634Q35126377-4ACD59D8-798C-4151-A1CD-0FB82AC88F64Q35630917-37209E94-CB29-4D07-B1C3-C4916E7AEAB1Q35693508-AC42FEE3-71C1-46DD-A3CC-1278B8BC2089Q35834082-5AC9C0BE-5CF2-40D3-BB3C-BF64C3883B03Q35842466-2B600E07-DB4F-4780-8866-D6558A6BB676Q35860638-90FDBC47-50FB-4018-9C4B-A91D263AAB38Q36330551-71AAEE72-CA1B-4809-89A3-9AFEF01E82D5Q36580857-F7260BF4-6114-49B9-A0A6-F4573AEF14FAQ36619937-B755F9ED-67B8-4F36-98C1-BCE4C46C6FC2Q36877029-9DED3BF3-95BE-40FE-892A-73632E1DCE07Q37488130-58858BB8-6128-4641-9F9B-70CDA92B4237Q37967550-DC0C11F4-AA7C-4501-B558-A56760A0E57DQ38007394-B7880AEA-6FDF-493E-9353-6ADC82C51B43Q38805134-1406A5CF-BA28-4A4D-970C-41E3F8EDD23EQ47099046-74584538-DC4C-4D33-95E8-B4C49520B607
P2860
HMMSplicer: a tool for efficient and sensitive discovery of known and novel splice junctions in RNA-Seq data
description
2010 nî lūn-bûn
@nan
2010 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
HMMSplicer: a tool for efficie ...... lice junctions in RNA-Seq data
@ast
HMMSplicer: a tool for efficie ...... lice junctions in RNA-Seq data
@en
type
label
HMMSplicer: a tool for efficie ...... lice junctions in RNA-Seq data
@ast
HMMSplicer: a tool for efficie ...... lice junctions in RNA-Seq data
@en
prefLabel
HMMSplicer: a tool for efficie ...... lice junctions in RNA-Seq data
@ast
HMMSplicer: a tool for efficie ...... lice junctions in RNA-Seq data
@en
P2093
P2860
P1433
P1476
HMMSplicer: a tool for efficie ...... lice junctions in RNA-Seq data
@en
P2093
Joseph L DeRisi
Katherine Sorber
Michelle T Dimon
P2860
P304
P356
10.1371/JOURNAL.PONE.0013875
P407
P577
2010-11-08T00:00:00Z