Orthologous gene clusters and taxon signature genes for viruses of prokaryotes - Test2 - elhamkhani - TriplyDB

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

http://www.wikidata.org/entity/Q34504150

about

A virocentric perspective on the evolution of life Emerging methods to study bacteriophage infection at the single-cell level The Double-Stranded DNA Virosphere as a Modular Hierarchical Network of Gene Sharing Evolution of double-stranded DNA viruses of eukaryotes: from bacteriophages to transposons to giant viruses Origin of giant viruses from smaller DNA viruses not from a fourth domain of cellular life eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences Spatially extensive microbial biogeography of the Indian Ocean provides insights into the unique community structure of a pristine coral atoll MetaPhinder-Identifying Bacteriophage Sequences in Metagenomic Data Sets The use of informativity in the development of robust viromics-based examinations Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages.Virus world as an evolutionary network of viruses and capsidless selfish elements.Classification and quantification of bacteriophage taxa in human gut metagenomes.Extensive gene remodeling in the viral world: new evidence for nongradual evolution in the mobilome network Chimeric viruses blur the borders between the major groups of eukaryotic single-stranded DNA viruses.Origins and evolution of viruses of eukaryotes: The ultimate modularity.Are viruses alive? The replicator paradigm sheds decisive light on an old but misguided question.The logic of DNA replication in double-stranded DNA viruses: insights from global analysis of viral genomes Temperate phages acquire DNA from defective prophages by relaxed homologous recombination: the role of Rad52-like recombinases.Bacteriophages: an underestimated role in human and animal health?A census of α-helical membrane proteins in double-stranded DNA viruses infecting bacteria and archaea.Evidence for horizontal gene transfer between Chlamydophila pneumoniae and Chlamydia phage Prokaryotic Virus Orthologous Groups (pVOGs): a resource for comparative genomics and protein family annotation.Time-series metagenomic analysis reveals robustness of soil microbiome against chemical disturbance.Acidianus Tailed Spindle Virus: a New Archaeal Large Tailed Spindle Virus Discovered by Culture-Independent Methods Mycobacteriophages as Incubators for Intein Dissemination and Evolution.Single-cell and population level viral infection dynamics revealed by phageFISH, a method to visualize intracellular and free viruses.Comparison of different assembly and annotation tools on analysis of simulated viral metagenomic communities in the gut.Scaffolding bacterial genomes and probing host-virus interactions in gut microbiome by proximity ligation (chromosome capture) assay GAMOLA2, a Comprehensive Software Package for the Annotation and Curation of Draft and Complete Microbial Genomes.HoloVir: A Workflow for Investigating the Diversity and Function of Viruses in Invertebrate Holobionts.Genome sequence of Candida versatilis and comparative analysis with other yeast.The Presence of Phage Orthologous Genes in Helicobacter pylori Correlates with the Presence of the Virulence Factors CagA and VacA.Spatial disturbances in altered mucosal and luminal gut viromes of diet-induced obese mice.Ecological and genetic interactions between cyanobacteria and viruses in a low-oxygen mat community inferred through metagenomics and metatranscriptomics.Narrow-host-range bacteriophages that infect Rhizobium etli associate with distinct genomic types.VICTOR: genome-based phylogeny and classification of prokaryotic viruses.Insights into origin and evolution of α-proteobacterial gene transfer agents.Bioinformatic Approaches for Comparative Analysis of Viruses.A human gut phage catalog correlates the gut phageome with type 2 diabetes.Phage Genome Annotation Using the RAST Pipeline.

P2860

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P2860

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

http://www.wikidata.org/entity/Q34504150

description

2012 nî lūn-bûn

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2012 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

@zh-mo

2012年論文

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2012年论文

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name

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

@ast

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

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Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

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type

label

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

@ast

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

@en

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

@nl

prefLabel

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

@ast

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

@en

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

@nl

P1433

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P1433

Journal of Bacteriology

P1476

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes

@en

P2093

Alison S Waller

http://www.w3.org/2001/XMLSchema#string

David M Kristensen

http://www.w3.org/2001/XMLSchema#string

Takuji Yamada

http://www.w3.org/2001/XMLSchema#string

P2860

Classification of Myoviridae bacteriophages using protein sequence similarity

The COG database: an updated version includes eukaryotes

Archaeal virus with exceptional virion architecture and the largest single-stranded DNA genome

Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome reads

Virioplankton: Viruses in Aquatic Ecosystems

Genomics of Bacterial and Archaeal Viruses: Dynamics within the Prokaryotic Virosphere

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Related haloarchaeal pleomorphic viruses contain different genome types

CDD: a Conserved Domain Database for the functional annotation of proteins

MUSCLE: multiple sequence alignment with high accuracy and high throughput

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941-950

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scholarly article

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10.1128/JB.01801-12

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5

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195

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Arcady Mushegian

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2012-12-07T00:00:00Z

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23222723

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3571318

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