L1000CDS2: LINCS L1000 characteristic direction signatures search engine - Test2 - elhamkhani - TriplyDB

L1000CDS2: LINCS L1000 characteristic direction signatures search engine

L1000CDS2: LINCS L1000 characteristic direction signatures search engine

http://www.wikidata.org/entity/Q36348069

about

An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study Reversal of cancer gene expression correlates with drug efficacy and reveals therapeutic targets A review of connectivity map and computational approaches in pharmacogenomics.Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data paraGSEA: a scalable approach for large-scale gene expression profiling.Common and cell-type specific responses to anti-cancer drugs revealed by high throughput transcript profiling.The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations.Cell-specific prediction and application of drug-induced gene expression profiles.Integration of pan-cancer transcriptomics with RPPA proteomics reveals mechanisms of epithelial-mesenchymal transition.A Reduced Transcriptome Approach to Assess Environmental Toxicants Using Zebrafish Embryo Test.Web-based drug repurposing tools: a survey.Evaluation of RNAi and CRISPR technologies by large-scale gene expression profiling in the Connectivity Map.Opportunities and obstacles for deep learning in biology and medicine.Datasets2Tools, repository and search engine for bioinformatics datasets, tools and canned analyses.Sustainable data and metadata management at the BD2K-LINCS Data Coordination and Integration Center.CellAtlasSearch: a scalable search engine for single cells.GDA, a web-based tool for Genomics and Drugs integrated analysis.Changing Trends in Computational Drug Repositioning.LINCS L1000 dataset-based repositioning of CGP-60474 as a highly potent anti-endotoxemic agent Expression-based drug screening of neural progenitor cells from individuals with schizophrenia

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P2860

L1000CDS2: LINCS L1000 characteristic direction signatures search engine

http://www.wikidata.org/entity/Q36348069

description

2016 nî lūn-bûn

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L1000CDS2: LINCS L1000 characteristic direction signatures search engine

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L1000CDS2: LINCS L1000 characteristic direction signatures search engine

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L1000CDS2: LINCS L1000 characteristic direction signatures search engine

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NPJ systems biology and applications

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L1000CDS2: LINCS L1000 characteristic direction signatures search engine

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Avi Ma'ayan

http://www.w3.org/2001/XMLSchema#string

Ben Readhead

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Joel T Dudley

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Mario Niepel

http://www.w3.org/2001/XMLSchema#string

Neil R Clark

http://www.w3.org/2001/XMLSchema#string

Nicolas F Fernandez

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Qiaonan Duan

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http://www.w3.org/2001/XMLSchema#string

Sarah R Tritsch

http://www.w3.org/2001/XMLSchema#string

St Patrick Reid

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P2860

Gene ontology: tool for the unification of biology

KEGG: kyoto encyclopedia of genes and genomes

DrugBank 4.0: shedding new light on drug metabolism

Significance analysis of microarrays applied to the ionizing radiation response

Inhibition of glycogen synthase kinase 3[beta] activity with lithium in vitro attenuates sepsis-induced changes in muscle protein turnover

Stat3: a STAT family member activated by tyrosine phosphorylation in response to epidermal growth factor and interleukin-6

Dynamics of the discovery process of protein-protein interactions from low content studies

The ENCODE (ENCyclopedia Of DNA Elements) Project

The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease

The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity

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10.1038/NPJSBA.2016.15

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2

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Peter K. Sorger

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2016-08-04T00:00:00Z

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28413689

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5389891

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