Ultra-deep sequencing for the analysis of viral populations.
about
A leafhopper-transmissible DNA virus with novel evolutionary lineage in the family geminiviridae implicated in grapevine redleaf disease by next-generation sequencingBiogenesis, Function, and Applications of Virus-Derived Small RNAs in PlantsUpdate on hepatitis B and C virus diagnosisViral quasispecies evolutionAccurate reconstruction of viral quasispecies spectra through improved estimation of strain richnessGenomic and functional characteristics of human cytomegalovirus revealed by next-generation sequencingHCV genotyping from NGS short reads and its application in genotype detection from HCV mixed infected plasmaAnalysis of Dengue Virus Genetic Diversity during Human and Mosquito Infection Reveals Genetic ConstraintsMolecular epidemiology, phylogeny and evolution of the filarial nematode Wuchereria bancroftiChallenges and opportunities in estimating viral genetic diversity from next-generation sequencing dataIn-Depth Analysis of HA and NS1 Genes in A(H1N1)pdm09 Infected PatientsReconstruction of viral population structure from next-generation sequencing data using multicommodity flowsUltra-deep pyrosequencing (UDPS) data treatment to study amplicon HCV minor variants.Virus genome dynamics under different propagation pressures: reconstruction of whole genome haplotypes of West Nile viruses from NGS dataDe novo meta-assembly of ultra-deep sequencing dataEstimation of genetic diversity in viral populations from next generation sequencing data with extremely deep coverage"Deep" sequencing accuracy and reproducibility using Roche/454 technology for inferring co-receptor usage in HIV-1.Molecular tools for studying HIV transmission in sexual networks.QuRe: software for viral quasispecies reconstruction from next-generation sequencing data.Biased estimates of clonal evolution and subclonal heterogeneity can arise from PCR duplicates in deep sequencing experiments.Hepatitis C Virus (HCV) NS3 sequence diversity and antiviral resistance-associated variant frequency in HCV/HIV coinfectionBLESS: bloom filter-based error correction solution for high-throughput sequencing reads.Read length versus depth of coverage for viral quasispecies reconstructionDeep sequencing of hepatitis C virus hypervariable region 1 reveals no correlation between genetic heterogeneity and antiviral treatment outcomeViral quasispecies inference from 454 pyrosequencing.VTBuilder: a tool for the assembly of multi isoform transcriptomes.Accurate single nucleotide variant detection in viral populations by combining probabilistic clustering with a statistical test of strand biasQuality score based identification and correction of pyrosequencing errors.V-Phaser 2: variant inference for viral populations.Comprehensive human virus screening using high-throughput sequencing with a user-friendly representation of bioinformatics analysis: a pilot studyWithin-host nucleotide diversity of virus populations: insights from next-generation sequencing.ViQuaS: an improved reconstruction pipeline for viral quasispecies spectra generated by next-generation sequencing.Applications of next-generation sequencing technologies to diagnostic virology.Comparison of Major and Minor Viral SNPs Identified through Single Template Sequencing and Pyrosequencing in Acute HIV-1 Infection.cFinder: definition and quantification of multiple haplotypes in a mixed sample.Inferring the Clonal Structure of Viral Populations from Time Series Sequencing.Identification of hepatitis C virus transmission using a next-generation sequencing approach.Quasispecies Analyses of the HIV-1 Near-full-length Genome With Illumina MiSeq.ESPRIT-Forest: Parallel clustering of massive amplicon sequence data in subquadratic time.Analysis of intra-host genetic diversity of Prunus necrotic ringspot virus (PNRSV) using amplicon next generation sequencing
P2860
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P2860
Ultra-deep sequencing for the analysis of viral populations.
description
article científic
@ca
article scientifique
@fr
articol științific
@ro
articolo scientifico
@it
artigo científico
@gl
artigo científico
@pt
artigo científico
@pt-br
artikel ilmiah
@id
artikull shkencor
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artículo científico
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name
Ultra-deep sequencing for the analysis of viral populations.
@en
Ultra-deep sequencing for the analysis of viral populations.
@nl
type
label
Ultra-deep sequencing for the analysis of viral populations.
@en
Ultra-deep sequencing for the analysis of viral populations.
@nl
prefLabel
Ultra-deep sequencing for the analysis of viral populations.
@en
Ultra-deep sequencing for the analysis of viral populations.
@nl
P1476
Ultra-deep sequencing for the analysis of viral populations.
@en
P304
P356
10.1016/J.COVIRO.2011.07.008
P577
2011-08-17T00:00:00Z