A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding. - Test2 - elhamkhani - TriplyDB

A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding.

A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding.

http://www.wikidata.org/entity/Q41783832

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YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities New insights into nucleosome and chromatin structure: an ordered state or a disordered affair?On the way of revealing coactivator complexes cross-talk during transcriptional activation Disentangling the many layers of eukaryotic transcriptional regulation Intergenic transcription causes repression by directing nucleosome assembly.Chromatin remodelling complex RSC promotes base excision repair in chromatin of Saccharomyces cerevisiae.SWI/SNF-like chromatin remodeling factor Fun30 supports point centromere function in S. cerevisiae.The RSC chromatin remodelling enzyme has a unique role in directing the accurate positioning of nucleosomes Chromatin particle spectrum analysis: a method for comparative chromatin structure analysis using paired-end mode next-generation DNA sequencing.Defining the budding yeast chromatin-associated interactome.Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro Yeast HMO1: Linker Histone Reinvented A dynamic interplay of nucleosome and Msn2 binding regulates kinetics of gene activation and repression following stress.A nucleosomal approach to inferring causal relationships of histone modifications.Single-cell nucleosome mapping reveals the molecular basis of gene expression heterogeneity Terminate and make a loop: regulation of transcriptional directionality.Dia2 controls transcription by mediating assembly of the RSC complex Identification of histone mutants that are defective for transcription-coupled nucleosome occupancy TrxG and PcG proteins but not methylated histones remain associated with DNA through replication.Epigenome characterization at single base-pair resolution.Mechanisms for ATP-dependent chromatin remodelling: the means to the end Mediator acts upstream of the transcriptional activator Gal4.Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation.RSC-dependent constructive and destructive interference between opposing arrays of phased nucleosomes in yeast.ATP-dependent chromatin remodeling shapes the long noncoding RNA landscape.Decoupling epigenetic and genetic effects through systematic analysis of gene position.The RSC complex localizes to coding sequences to regulate Pol II and histone occupancy An effect of DNA sequence on nucleosome occupancy and removal.Activator-independent transcription of Snf1-dependent genes in mutants lacking histone tails Nucleosome free regions in yeast promoters result from competitive binding of transcription factors that interact with chromatin modifiers.Multiple sequence-specific factors generate the nucleosome-depleted region on CLN2 promoter.Nucleosomes are stably evicted from enhancers but not promoters upon induction of certain pro-inflammatory genes in mouse macrophages.Dynamics of nucleosome invasion by DNA binding proteins.Transcriptional regulation in Saccharomyces cerevisiae: transcription factor regulation and function, mechanisms of initiation, and roles of activators and coactivators.The role of chromatin accessibility in directing the widespread, overlapping patterns of Drosophila transcription factor binding.In vivo role for the chromatin-remodeling enzyme SWI/SNF in the removal of promoter nucleosomes by disassembly rather than sliding.Interplay between histone H3 lysine 56 deacetylation and chromatin modifiers in response to DNA damage.Activation-induced disruption of nucleosome position clusters on the coding regions of Gcn4-dependent genes extends into neighbouring genes.Tripartite organization of centromeric chromatin in budding yeast.Remodelers organize cellular chromatin by counteracting intrinsic histone-DNA sequence preferences in a class-specific manner.

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P2860

A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding.

http://www.wikidata.org/entity/Q41783832

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2010 nî lūn-bûn

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J.CELL.2010.03.048

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A RSC/nucleosome complex deter ...... facilitates activator binding.

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Alexander Krasnitz

http://www.w3.org/2001/XMLSchema#string

Asya Stepansky

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Dan Spagna

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David Alvarez

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Gene O Bryant

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Georgina Berrozpe

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James Hicks

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Jude Kendall

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Mark Ptashne

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Monique Floer

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P2860

Mapping short DNA sequencing reads and calling variants using mapping quality scores

Structural Basis for Dimerization in DNA Recognition by Gal4

A Rsc3/Rsc30 zinc cluster dimer reveals novel roles for the chromatin remodeler RSC in gene expression and cell cycle control.

A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

Sth1p, a Saccharomyces cerevisiae Snf2p/Swi2p homolog, is an essential ATPase in RSC and differs from Snf/Swi in its interactions with histones and chromatin-associated proteins.

The RSC chromatin remodeling complex bears an essential fungal-specific protein module with broad functional roles.

Independent recruitment in vivo by Gal4 of two complexes required for transcription

Activator control of nucleosome occupancy in activation and repression of transcription.

Genome-wide views of chromatin structure

Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo.

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407-418

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10.1016/J.CELL.2010.03.048

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3

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141

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43534011

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20434983

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