Optimization based automated curation of metabolic reconstructions.
about
A protocol for generating a high-quality genome-scale metabolic reconstructionPathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology.Physiologically Shrinking the Solution Space of a Saccharomyces cerevisiae Genome-Scale Model Suggests the Role of the Metabolic Network in Shaping Gene Expression NoiseSoftware applications for flux balance analysisRecent Developments in Systems Biology and Metabolic Engineering of Plant-Microbe Interactions.Integration of metabolomics data into metabolic networksComputational Methods for Modification of Metabolic NetworksQuantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0A genome-scale metabolic reconstruction of Mycoplasma genitalium, iPS189Genetic co-occurrence network across sequenced microbesShrinking the metabolic solution space using experimental datasetsReconstruction and validation of a genome-scale metabolic model for the filamentous fungus Neurospora crassa using FARMComparative genome-scale reconstruction of gapless metabolic networks for present and ancestral speciesConsistency Analysis of Genome-Scale Models of Bacterial Metabolism: A Metamodel ApproachAssessment of FBA Based Gene Essentiality Analysis in Cancer with a Fast Context-Specific Network Reconstruction MethodComputational approaches for microalgal biofuel optimization: a reviewA constraint-based model of Scheffersomyces stipitis for improved ethanol productionModeling central metabolism and energy biosynthesis across microbial lifeConstruction and completion of flux balance models from pathway databasesReconstruction of biochemical networks in microorganismsModel-enabled gene search (MEGS) allows fast and direct discovery of enzymatic and transport gene functions in the marine bacterium Vibrio fischeri.Metabolic network-guided binning of metagenomic sequence fragments.Metabolic network modeling of microbial communities.Linking genome-scale metabolic modeling and genome annotationReconstruction of genome-scale human metabolic models using omics data.Prioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor.Improved Metabolic Models for E. coli and Mycoplasma genitalium from GlobalFit, an Algorithm That Simultaneously Matches Growth and Non-Growth Data Sets.Discovering missing reactions of metabolic networks by using gene co-expression dataGenome-scale models of bacterial metabolism: reconstruction and applications.GrowMatch: an automated method for reconciling in silico/in vivo growth predictionsUsing chemical organization theory for model checking.Inferring branching pathways in genome-scale metabolic networksFlux-sum analysis: a metabolite-centric approach for understanding the metabolic network.Challenges in experimental data integration within genome-scale metabolic models.Evolution of substrate specificity in a retained enzyme driven by gene lossGenome-scale metabolic network reconstruction and in silico flux analysis of the thermophilic bacterium Thermus thermophilus HB27.An automated phenotype-driven approach (GeneForce) for refining metabolic and regulatory models.Harnessing nature's toolbox: regulatory elements for synthetic biology.Improving the iMM904 S. cerevisiae metabolic model using essentiality and synthetic lethality dataMetabolic reconstruction of the archaeon methanogen Methanosarcina Acetivorans.
P2860
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P2860
Optimization based automated curation of metabolic reconstructions.
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
Optimization based automated curation of metabolic reconstructions.
@en
Optimization based automated curation of metabolic reconstructions.
@nl
type
label
Optimization based automated curation of metabolic reconstructions.
@en
Optimization based automated curation of metabolic reconstructions.
@nl
prefLabel
Optimization based automated curation of metabolic reconstructions.
@en
Optimization based automated curation of metabolic reconstructions.
@nl
P2860
P356
P1433
P1476
Optimization based automated curation of metabolic reconstructions.
@en
P2093
Madhukar S Dasika
Vinay Satish Kumar
P2860
P2888
P356
10.1186/1471-2105-8-212
P577
2007-06-20T00:00:00Z
P5875
P6179
1023395418