FireDock: fast interaction refinement in molecular docking.
about
Structural insight of dopamine β-hydroxylase, a drug target for complex traits, and functional significance of exonic single nucleotide polymorphismsIdentification of a potential tumor differentiation factor receptor candidate in prostate cancer cellsA smoothed backbone-dependent rotamer library for proteins derived from adaptive kernel density estimates and regressionsCHARMM: the biomolecular simulation programSurfing the Protein-Protein Interaction Surface Using Docking Methods: Application to the Design of PPI InhibitorsSampling and scoring: a marriage made in heavenCrystal Structures of the Lumazine Protein from Photobacterium kishitanii in Complexes with the Authentic Chromophore, 6,7-Dimethyl- 8-(1'-D-Ribityl) Lumazine, and Its Analogues, Riboflavin and Flavin Mononucleotide, at High ResolutionStructure and Mechanism of the trans -Acting Acyltransferase from the Disorazole SynthaseTowards peptide vaccines against Zika virus: Immunoinformatics combined with molecular dynamics simulations to predict antigenic epitopes of Zika viral proteinsEndonuclease G interacts with histone H2B and DNA topoisomerase II alpha during apoptosisA far-red fluorescent protein evolved from a cyanobacterial phycobiliprotein.The ASPP interaction network: electrostatic differentiation between pro- and anti-apoptotic proteinsProtein-protein docking with F(2)Dock 2.0 and GB-rerankComparative molecular docking analysis of cytoplasmic dynein light chain DYNLL1 with pilin to explore the molecular mechanism of pathogenesis caused by Pseudomonas aeruginosa PAOThe structural pathway of interleukin 1 (IL-1) initiated signaling reveals mechanisms of oncogenic mutations and SNPs in inflammation and cancerBiochemical and cellular evidence demonstrating AKT-1 as a binding partner for resveratrol targeting protein NQO2The interaction of RNA helicase DDX3 with HIV-1 Rev-CRM1-RanGTP complex during the HIV replication cycleComparative Proteomic Analysis of Aminoglycosides Resistant and Susceptible Mycobacterium tuberculosis Clinical Isolates for Exploring Potential Drug TargetsStructure- and modeling-based identification of the adenovirus E4orf4 binding site in the protein phosphatase 2A B55α subunitGlobal identification and characterization of both O-GlcNAcylation and phosphorylation at the murine synapseNovel Nuclear Factor-KappaB Targeting Peptide Suppresses β-Amyloid Induced Inflammatory and Apoptotic Responses in Neuronal CellsModBase, a database of annotated comparative protein structure models and associated resources.The impact of side-chain packing on protein docking refinementProtein-protein structure prediction by scoring molecular dynamics trajectories of putative poses.Using correlated parameters for improved ranking of protein-protein docking decoys.Monte Carlo replica-exchange based ensemble docking of protein conformations.Myosin B of Plasmodium falciparum (PfMyoB): in silico prediction of its three-dimensional structure and its possible interaction with MTIP.The Immune Epitope Database and Analysis Resource in Epitope Discovery and Synthetic Vaccine DesignProtein structure prediction using a docking-based hierarchical folding scheme.Minimal ensembles of side chain conformers for modeling protein-protein interactionsARS-interacting multi-functional protein 1 induces proliferation of human bone marrow-derived mesenchymal stem cells by accumulation of β-catenin via fibroblast growth factor receptor 2-mediated activation of AktMEGADOCK: an all-to-all protein-protein interaction prediction system using tertiary structure data.DrugScorePPI knowledge-based potentials used as scoring and objective function in protein-protein docking.Pseudomonas aeruginosa MurE amide ligase: enzyme kinetics and peptide inhibitor.Evolutionary constraints acting on DDX3X protein potentially interferes with Rev-mediated nuclear export of HIV-1 RNA.Protein-protein recognition between acyltransferases and acyl carrier proteins in multimodular polyketide synthases.Proteomic analysis of streptomycin resistant and sensitive clinical isolates of Mycobacterium tuberculosisSurfactant protein D inhibits HIV-1 infection of target cells via interference with gp120-CD4 interaction and modulates pro-inflammatory cytokine production.DECK: Distance and environment-dependent, coarse-grained, knowledge-based potentials for protein-protein docking.FiberDock: a web server for flexible induced-fit backbone refinement in molecular docking.
P2860
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P2860
FireDock: fast interaction refinement in molecular docking.
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年学术文章
@wuu
2007年学术文章
@zh-cn
2007年学术文章
@zh-hans
2007年学术文章
@zh-my
2007年学术文章
@zh-sg
2007年學術文章
@yue
2007年學術文章
@zh
2007年學術文章
@zh-hant
name
FireDock: fast interaction refinement in molecular docking.
@en
FireDock: fast interaction refinement in molecular docking.
@nl
type
label
FireDock: fast interaction refinement in molecular docking.
@en
FireDock: fast interaction refinement in molecular docking.
@nl
prefLabel
FireDock: fast interaction refinement in molecular docking.
@en
FireDock: fast interaction refinement in molecular docking.
@nl
P356
P1433
P1476
FireDock: fast interaction refinement in molecular docking.
@en
P2093
Haim J Wolfson
Nelly Andrusier
P304
P356
10.1002/PROT.21495
P407
P577
2007-10-01T00:00:00Z