MODBASE, a database of annotated comparative protein structure models and associated resources. - Test2 - elhamkhani - TriplyDB

MODBASE, a database of annotated comparative protein structure models and associated resources.

MODBASE, a database of annotated comparative protein structure models and associated resources.

http://www.wikidata.org/entity/Q55129477

about

Identification of attractive drug targets in neglected-disease pathogens using an in silico approach The Wnt/planar cell polarity protein-tyrosine kinase-7 (PTK7) is a highly efficient proteolytic target of membrane type-1 matrix metalloproteinase: implications in cancer and embryogenesis.The sedoheptulose kinase CARKL directs macrophage polarization through control of glucose metabolism Fur and the novel regulator YqjI control transcription of the ferric reductase gene yqjH in Escherichia coli The Structural Biology Knowledgebase: a portal to protein structures, sequences, functions, and methods ModBase, a database of annotated comparative protein structure models, and associated resources SAHG, a comprehensive database of predicted structures of all human proteins Computational methods in drug discovery Structure of a trimeric bacterial microcompartment shell protein, EtuB, associated with ethanol utilization in Clostridium kluyveri Structure of the Human Sulfhydryl Oxidase Augmenter of Liver Regeneration and Characterization of a Human Mutation Causing an Autosomal Recessive Myopathy,Structural studies on the enzyme complex isopropylmalate isomerase (LeuCD) from Mycobacterium tuberculosis Discovery of α,β- and α,γ-diamino acid scaffolds for the inhibition of M1 family aminopeptidases Dual functions of the Hsm3 protein in chaperoning and scaffolding regulatory particle subunits during the proteasome assembly A conserved coatomer-related complex containing Sec13 and Seh1 dynamically associates with the vacuole in Saccharomyces cerevisiae.The Mycobacterium tuberculosis drugome and its polypharmacological implications Structural annotation of Mycobacterium tuberculosis proteome Evolution of multidrug resistance during Staphylococcus aureus infection involves mutation of the essential two component regulator WalKR A new F131V mutation in Chlamydomonas phytoene desaturase locates a cluster of norflurazon resistance mutations near the FAD-binding site in 3D protein models Optimal ligand descriptor for pocket recognition based on the Beta-shape The UCSC Archaeal Genome Browser: 2012 update A lipocalin sequence signature modulates cell survival.ModBase, a database of annotated comparative protein structure models and associated resources.Protein Bioinformatics Infrastructure for the Integration and Analysis of Multiple High-Throughput "omics" Data.Exome-Scale Discovery of Hotspot Mutation Regions in Human Cancer Using 3D Protein Structure.Absolute quality evaluation of protein model structures using statistical potentials with respect to the native and reference states.Virtual ligand screening against comparative protein structure models.The Protein Structure Initiative: achievements and visions for the future.The Protein Structure Initiative Structural Biology Knowledgebase Technology Portal: a structural biology web resource.Template-based protein structure modeling using the RaptorX web server.PI(2)PE: A Suite of Web Servers for Predictions Ranging From Protein Structure to Binding Kinetics.Molecular docking screens using comparative models of proteins Integrative structure modeling of macromolecular assemblies from proteomics data The DNA relaxation activity and covalent complex accumulation of Mycobacterium tuberculosis topoisomerase I can be assayed in Escherichia coli: application for identification of potential FRET-dye labeling sites.From protein sequences to 3D-structures and beyond: the example of the UniProt knowledgebase.Optimizing structural modeling for a specific protein scaffold: knottins or inhibitor cystine knots.Comparison of human solute carriers Targeting TLR4 signaling by TLR4 Toll/IL-1 receptor domain-derived decoy peptides: identification of the TLR4 Toll/IL-1 receptor domain dimerization interface.Lettuce costunolide synthase (CYP71BL2) and its homolog (CYP71BL1) from sunflower catalyze distinct regio- and stereoselective hydroxylations in sesquiterpene lactone metabolism.Prediction of protease substrates using sequence and structure features.Struct2Net: a web service to predict protein-protein interactions using a structure-based approach

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P2860

MODBASE, a database of annotated comparative protein structure models and associated resources.

http://www.wikidata.org/entity/Q55129477

description

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MODBASE, a database of annotat ...... dels and associated resources.

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Andrej Sali

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Ben M Webb

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P2860

Finding cures for tropical diseases: is open source an answer?

Draft genome of the filarial nematode parasite Brugia malayi

OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups.

The Universal Protein Resource (UniProt): an expanding universe of protein information.

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

The Universal Protein Resource (UniProt)

Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders

Core signaling pathways in human pancreatic cancers revealed by global genomic analyses

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37

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protein structure

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