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Pooling across cells to normalize single-cell RNA sequencing data with many zero counts.A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor.Repression of Igf1 expression by Ezh2 prevents basal cell differentiation in the developing lungdiffHic: a Bioconductor package to detect differential genomic interactions in Hi-C data.Transcriptome and H3K27 tri-methylation profiling of Ezh2-deficient lung epithelium.No counts, no variance: allowing for loss of degrees of freedom when assessing biological variability from RNA-seq data.Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations.Infrastructure for genomic interactions: Bioconductor classes for Hi-C, ChIA-PET and related experiments.EGF-mediated induction of Mcl-1 at the switch to lactation is essential for alveolar cell survival.From reads to genes to pathways: differential expression analysis of RNA-Seq experiments using Rsubread and the edgeR quasi-likelihood pipelineAcetylation of the Cd8 Locus by KAT6A Determines Memory T Cell Diversity.RUNX2 Mediates Plasmacytoid Dendritic Cell Egress from the Bone Marrow and Controls Viral Immunity.Mass trees: a new phylogenetic approach and algorithm to chart evolutionary history with mass spectrometry.Polycomb repressive complex 2 (PRC2) suppresses Eμ-myc lymphoma.beachmat: A Bioconductor C++ API for accessing high-throughput biological data from a variety of R matrix types.Genome-wide analysis reveals no evidence of trans chromosomal regulation of mammalian immune development.Detection and removal of barcode swapping in single-cell RNA-seq dataT cell cytolytic capacity is independent of initial stimulation strengthSpecificity of RNAi, LNA and CRISPRi as loss-of-function methods in transcriptional analysisDistinguishing cells from empty droplets in droplet-based single-cell RNA sequencing dataBatch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighborsSpecificity of RNAi, LNA and CRISPRi as loss-of-function methods in transcriptional analysisDetection and removal of barcode swapping in single-cell RNA-seq dataCOMRADES determines in vivo RNA structures and interactionsA high-content RNAi screen reveals multiple roles for long noncoding RNAs in cell division
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P50
description
researcher ORCID ID = 0000-0002-3564-4813
@en
wetenschapper
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name
Aaron Lun
@ast
Aaron Lun
@en
Aaron Lun
@es
Aaron Lun
@nl
type
label
Aaron Lun
@ast
Aaron Lun
@en
Aaron Lun
@es
Aaron Lun
@nl
prefLabel
Aaron Lun
@ast
Aaron Lun
@en
Aaron Lun
@es
Aaron Lun
@nl
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56226107700
P21
P31
P496
0000-0002-3564-4813