Noise contributions in an inducible genetic switch: a whole-cell simulation study
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Comparing protein folding in vitro and in vivo: foldability meets the fitness challengeA Complete Pathway Model for Lipid A Biosynthesis in Escherichia coliTowards a computational model of a methane producing archaeumAutomated single cell microbioreactor for monitoring intracellular dynamics and cell growth in free solutionLattice Microbes: high-performance stochastic simulation method for the reaction-diffusion master equation.Simulation of reaction diffusion processes over biologically relevant size and time scales using multi-GPU workstations.Time delay induced transition of gene switch and stochastic resonance in a genetic transcriptional regulatory model.Diagnostics for stochastic genome-scale modeling via model slicing and debuggingReaDDy--a software for particle-based reaction-diffusion dynamics in crowded cellular environmentsProtein stability and folding kinetics in the nucleus and endoplasmic reticulum of eucaryotic cellsSpace-induced bifurcation in repression-based transcriptional circuits.Iterative experiment design guides the characterization of a light-inducible gene expression circuitSources of Variability in a Synthetic Gene Oscillator.A biophysical model of supercoiling dependent transcription predicts a structural aspect to gene regulation.Toward a Whole-Cell Model of Ribosome Biogenesis: Kinetic Modeling of SSU Assembly.Effects of DNA replication on mRNA noise.Whole Cell Modeling: From Single Cells to Colonies.Heterogeneity in protein expression induces metabolic variability in a modeled Escherichia coli population.Predictive biophysical modeling and understanding of the dynamics of mRNA translation and its evolution.Reaching new levels of realism in modeling biological macromolecules in cellular environments.Foundations for modeling the dynamics of gene regulatory networks: a multilevel-perspective review.The future of whole-cell modeling.What makes the lac-pathway switch: identifying the fluctuations that trigger phenotype switching in gene regulatory systems.Bursting noise in gene expression dynamics: linking microscopic and mesoscopic models.Challenges of Integrating Stochastic Dynamics and Cryo-Electron Tomograms in Whole-Cell Simulations.Dynamics of simple gene-network motifs subject to extrinsic fluctuations.Parameter discovery in stochastic biological models using simulated annealing and statistical model checking.Ribosome biogenesis in replicating cells: Integration of experiment and theoryAn integrative, multi-scale, genome-wide model reveals the phenotypic landscape of Escherichia coli.The dawn of virtual cell biology.Digital biology: a new era has begun.Why Build Whole-Cell Models?Effects of cell cycle noise on excitable gene circuits.Emerging whole-cell modeling principles and methods.A Digitally Programmable Cytomorphic Chip for Simulation of Arbitrary Biochemical Reaction Networks.Determining the stability of genetic switches: explicitly accounting for mRNA noise.Extrinsic Noise Driven Phenotype Switching in a Self-Regulating Gene
P2860
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P2860
Noise contributions in an inducible genetic switch: a whole-cell simulation study
description
2011 nî lūn-bûn
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2011 թուականի Մարտին հրատարակուած գիտական յօդուած
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2011 թվականի մարտին հրատարակված գիտական հոդված
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2011年の論文
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2011年学术文章
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2011年学术文章
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2011年学术文章
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2011年学术文章
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2011年学术文章
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2011年學術文章
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name
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@ast
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@en
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@nl
type
label
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@ast
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@en
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@nl
prefLabel
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@ast
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@en
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@nl
P2093
P2860
P3181
P1476
Noise contributions in an inducible genetic switch: a whole-cell simulation study
@en
P2093
Elijah Roberts
Julio O Ortiz
Wolfgang Baumeister
P2860
P304
P3181
P356
10.1371/JOURNAL.PCBI.1002010
P407
P577
2011-03-10T00:00:00Z