The Princeton Protein Orthology Database (P-POD): a comparative genomics analysis tool for biologists - Wikidata - thesis-toulmin - TriplyDB

The Princeton Protein Orthology Database (P-POD): a comparative genomics analysis tool for biologists

The Princeton Protein Orthology Database (P-POD): a comparative genomics analysis tool for biologists

http://www.wikidata.org/entity/Q33294829

about

Yeast: an experimental organism for 21st Century biology Oxidative stress in Alzheimer's and Parkinson's diseases: insights from the yeast Saccharomyces cerevisiae The GMOD Drupal bioinformatic server framework Yeast toxicogenomics: genome-wide responses to chemical stresses with impact in environmental health, pharmacology, and biotechnology Efforts to make and apply humanized yeast Toward community standards in the quest for orthologs Exploiting orthologue diversity for systematic detection of gain-of-function phenotypes.The Gene Ontology's Reference Genome Project: a unified framework for functional annotation across species.ProPhylER: a curated online resource for protein function and structure based on evolutionary constraint analyses.The yeast deletion collection: a decade of functional genomics Identification of common genetic modifiers of neurodegenerative diseases from an integrative analysis of diverse genetic screens in model organisms Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium ProteinHistorian: tools for the comparative analysis of eukaryote protein origin.Novel genes exhibit distinct patterns of function acquisition and network integration.Simple topological features reflect dynamics and modularity in protein interaction networks.An "exacerbate-reverse" strategy in yeast identifies histone deacetylase inhibition as a correction for cholesterol and sphingolipid transport defects in human Niemann-Pick type C disease.SIRT1 and SIRT3 deacetylate homologous substrates: AceCS1,2 and HMGCS1,2.The Toxic Effects of Pathogenic Ataxin-3 Variants in a Yeast Cellular Model Genome-Wide Detection and Analysis of Multifunctional Genes Mutant power: using mutant allele collections for yeast functional genomics.A draft network of ligand-receptor-mediated multicellular signalling in human.Mutability and mutational spectrum of chromosome transmission fidelity genes Quantitative evidence for conserved longevity pathways between divergent eukaryotic species.An extended set of yeast-based functional assays accurately identifies human disease mutations.Proteome-wide discovery of evolutionary conserved sequences in disordered regions.Inferring protein function from homology using the Princeton Protein Orthology Database (P-POD).Family classification without domain chaining.Contemporary, yeast-based approaches to understanding human genetic variation.Reassessing domain architecture evolution of metazoan proteins: major impact of gene prediction errors.Types of cell death and methods of their detection in yeast Saccharomyces cerevisiae.Invertebrate and fungal model organisms: emerging platforms for drug discovery.Harnessing the power of yeast to unravel the molecular basis of neurodegeneration.Unraveling protein misfolding diseases using model systems From the baker to the bedside: yeast models of Parkinson's disease.Exacerbating and reversing lysosomal storage diseases: from yeast to humans.Systematic bacterialization of yeast genes identifies a near-universally swappable pathway.Open source tool for prediction of genome wide protein-protein interaction network based on ortholog information.Saccharomyces genome database informs human biology.Identifying direct contacts between protein complex subunits from their conditional dependence in proteomics datasets.Microbial genome analysis: the COG approach.

P2860

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P2860

The Princeton Protein Orthology Database (P-POD): a comparative genomics analysis tool for biologists

http://www.wikidata.org/entity/Q33294829

description

2007 nî lūn-bûn

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2007 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

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2007 թվականի օգոստոսին հրատարակված գիտական հոդված

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2007年の論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年论文

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The Princeton Protein Ortholog ...... s analysis tool for biologists

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The Princeton Protein Ortholog ...... s analysis tool for biologists

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The Princeton Protein Ortholog ...... s analysis tool for biologists

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Charles Lu

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Fan Kang

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Kara Dolinski

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P2860

The COG database: an updated version includes eukaryotes

Hepatitis C virus core protein binds to a DEAD box RNA helicase

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Functional expression in yeast of the human secretory pathway Ca(2+), Mn(2+)-ATPase defective in Hailey-Hailey disease

Isolation and functional expression of human COQ2, a gene encoding a polyprenyl transferase involved in the synthesis of CoQ

Copper-induced trafficking of the cU-ATPases: a key mechanism for copper homeostasis

ALG12 mannosyltransferase defect in congenital disorder of glycosylation type lg

Bloom's and Werner's syndrome genes suppress hyperrecombination in yeast sgs1 mutant: implication for genomic instability in human diseases

A homologue of Saccharomyces cerevisiae Dpm1p is not sufficient for synthesis of dolichol-phosphate-mannose in mammalian cells

The NF1 locus encodes a protein functionally related to mammalian GAP and yeast IRA proteins

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scholarly article

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Samuel V Angiuoli

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