Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions
about
Control of a neuronal morphology program by an RNA-binding zinc finger protein, UnkemptGlobal RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivoiCLIP: protein-RNA interactions at nucleotide resolutionNSun2-mediated cytosine-5 methylation of vault noncoding RNA determines its processing into regulatory small RNAsTiny giants of gene regulation: experimental strategies for microRNA functional studiesSeq and CLIP through the miRNA worldMeans to an end: mechanisms of alternative polyadenylation of messenger RNA precursorsSingle molecule fluorescence approaches shed light on intracellular RNAsRNA protein interaction in neuronsMapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysisDeficient methylation and formylation of mt-tRNA(Met) wobble cytosine in a patient carrying mutations in NSUN3Both Maintenance and Avoidance of RNA-Binding Protein Interactions Constrain Coding Sequence Evolution.Stem cells and modeling of autism spectrum disorders.PIPE-CLIP: a comprehensive online tool for CLIP-seq data analysis.Assessing Computational Steps for CLIP-Seq Data Analysis.CoSpliceNet: a framework for co-splicing network inference from transcriptomics dataAdvancing the functional utility of PAR-CLIP by quantifying background binding to mRNAs and lncRNAsPervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiaeRNAmotifs: prediction of multivalent RNA motifs that control alternative splicing.RNA Bind-n-Seq: quantitative assessment of the sequence and structural binding specificity of RNA binding proteins.Global protein-RNA interaction mapping at single nucleotide resolution by iCLIP-seq.The dynamic epitranscriptome: N6-methyladenosine and gene expression controlEndogenous miRNA and target concentrations determine susceptibility to potential ceRNA competition.Endogenous microRNA sponges: evidence and controversy.PTRcombiner: mining combinatorial regulation of gene expression from post-transcriptional interaction mapsExon Junction Complexes Show a Distributional Bias toward Alternatively Spliced mRNAs and against mRNAs Coding for Ribosomal Proteins.Leveraging cross-link modification events in CLIP-seq for motif discovery.Computational challenges, tools, and resources for analyzing co- and post-transcriptional events in high throughput.Genome-wide mapping of cellular protein-RNA interactions enabled by chemical crosslinking.MicroRNA Screening and the Quest for Biologically Relevant Targets.RNA Bind-n-Seq: Measuring the Binding Affinity Landscape of RNA-Binding Proteins.Design and bioinformatics analysis of genome-wide CLIP experiments.Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome.MicroRNA target prediction using thermodynamic and sequence curvesRNA Structures as Mediators of Neurological Diseases and as Drug Targets.The many faces of long noncoding RNAsCapture and sequencing of NAD-capped RNA sequences with NAD captureSeq.From benchmarking HITS-CLIP peak detection programs to a new method for identification of miRNA-binding sites from Ago2-CLIP dataHighly accessible AU-rich regions in 3' untranslated regions are hotspots for binding of regulatory factors.CLIPSeqTools--a novel bioinformatics CLIP-seq analysis suite.
P2860
Q24321460-B7926AB1-7B91-414C-BAE1-4787ABCE2522Q24490554-C604F2D3-5B7C-47FD-A3AF-2D8360D09623Q24568028-5457FFBE-911E-4514-9546-BB13E51EB188Q24634597-FE72C452-9634-41F3-8681-71DD0D6CC464Q26767339-2FAA7138-E280-4619-A8CE-93742C2792B0Q26852679-34E4D7A9-6391-428E-A0EF-A150E73C22B8Q26852725-48397758-219F-405C-83B5-7F78B118B38FQ26999350-7587BAE0-D649-4914-8341-518A8EFB0BD1Q27001674-4043A7FF-0DC2-4071-B56A-4F2BD18D0917Q28305549-E6AE22CC-C466-46B8-88C2-AC37F81F6CADQ28596578-CDCBFBD8-20C0-4F69-9738-C2A39331DE4EQ30398026-BD2C2218-5728-4E5C-9A7D-EB66CF8FE8CFQ30401824-4B3D5E40-D077-495C-9183-F21693C683A8Q30739562-26144F61-18DF-43C2-A46F-F49BDE954F67Q31018288-8C945662-F943-403A-860E-14FDDF442974Q31139769-792F7B68-DCFA-452E-9DAE-EE93BB474082Q33741897-DBB808BB-C85B-487B-A6FD-7949861412AAQ33742594-853E1048-3D8E-4A14-988D-F7B58E02AD7BQ33744637-0363508B-76A3-4F42-9FE6-14A650E9C502Q34079444-7562BC2F-DC0D-4739-A615-AC265A2822B6Q34405138-4ABB2ABE-ACF5-4821-918D-CEEAD767A684Q34414288-EE47FD38-D13B-4699-87D2-5B687BB26D28Q34450822-23392AF2-41F0-48E3-8AEA-1D6A1B154756Q34520689-3697ED6E-10B9-4D79-8D58-6BF655E49473Q34525695-C03D85E3-373D-416A-8ED3-8FF280241275Q34535838-AAAE5D8C-21AF-4653-8269-B0DB1CC40E73Q34883312-62B83489-16D1-46A1-8D33-13ACFB7DD3A6Q35417365-720CD3B7-DFF6-436E-A61C-1A5435FDAC08Q35543549-77974B7E-EF59-4613-96D8-E54BAB0A0C96Q35590504-AB8429B3-55AE-456F-8C7B-2FA839360949Q35661994-F7F47659-3EC2-41DF-896F-F9FCB42F2DABQ35770670-BBC377B3-C600-4FC9-AB30-CEC1BB697B3AQ35804751-20F4DE25-53CD-47E5-9D77-23E7700F660DQ35853313-7F7FBAD0-C3A8-4909-80F2-BA027DEBB5E1Q35868044-ADDCF268-F2E0-40DD-92BD-EBA8E6177AAEQ35903450-367BEFF2-5312-431B-8AA7-AC18DB29EED7Q36224514-0B41DF05-B520-452E-A088-BC977B94F589Q36256189-9EEADE83-2864-4E44-9521-E79EC595B1BBQ36347069-64FFBF6E-E98C-4CEA-A502-DA2E22B46AC2Q36406286-015832F9-6058-4960-8205-1745DA12F47F
P2860
Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions
description
2012 nî lūn-bûn
@nan
2012 թուականին հրատարակուած գիտական յօդուած
@hyw
2012 թվականին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@ast
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@en
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@en-gb
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@nl
type
label
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@ast
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@en
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@en-gb
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@nl
prefLabel
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@ast
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@en
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@en-gb
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@nl
P2093
P2860
P50
P3181
P356
P1433
P1476
Analysis of CLIP and iCLIP met ...... es of protein-RNA interactions
@en
P2093
Blaž Zupan
Shobbir Hussain
Yoichiro Sugimoto
P2860
P2888
P3181
P356
10.1186/GB-2012-13-8-R67
P407
P577
2012-01-01T00:00:00Z
P5875
P6179
1011415000