A gold standard set of mechanistically diverse enzyme superfamilies. - Wikidata - wikimedia - TriplyDB

A gold standard set of mechanistically diverse enzyme superfamilies.

A gold standard set of mechanistically diverse enzyme superfamilies.

http://www.wikidata.org/entity/Q21184154

about

Annotation error in public databases: misannotation of molecular function in enzyme superfamilies Functional classification using phylogenomic inference A large-scale evaluation of computational protein function prediction The Enzyme Function Initiative.Improving classification in protein structure databases using text mining.High precision multi-genome scale reannotation of enzyme function by EFICAz.Towards structured output prediction of enzyme function GeMMA: functional subfamily classification within superfamilies of predicted protein structural domains.Improving the quality of protein similarity network clustering algorithms using the network edge weight distribution.Biocuration in the structure-function linkage database: the anatomy of a superfamily Functional classification of protein 3D structures from predicted local interaction sites.High-quality sequence clustering guided by network topology and multiple alignment likelihood.Cutoff Scanning Matrix (CSM): structural classification and function prediction by protein inter-residue distance patterns Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies.Seq2Ref: a web server to facilitate functional interpretation Evaluation and improvements of clustering algorithms for detecting remote homologous protein families.Biochemical functional predictions for protein structures of unknown or uncertain function HMM-ModE: implementation, benchmarking and validation with HMMER3.Massive fungal biodiversity data re-annotation with multi-level clustering DomSign: a top-down annotation pipeline to enlarge enzyme space in the protein universe.Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family.MotifCluster: an interactive online tool for clustering and visualizing sequences using shared motifs.Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamilies Functional Annotations of Paralogs: A Blessing and a Curse The Structure-Function Linkage Database FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies.Comparison of topological clustering within protein networks using edge metrics that evaluate full sequence, full structure, and active site microenvironment similarity.Community detection in sequence similarity networks based on attribute clustering.Genomic Enzymology: Web Tools for Leveraging Protein Family Sequence-Function Space and Genome Context to Discover Novel Functions.Characterization and prediction of residues determining protein functional specificity.Predicting enzymatic function from global binding site descriptors.Comprehensive cluster analysis with Transitivity Clustering.Accurate prediction of interfacial residues in two-domain proteins using evolutionary information: implications for three-dimensional modeling.Recognition of protein function using the local similarity.New computational approaches to understanding molecular protein function.

P2860

Q21145347-70D0C57C-57FC-4C73-AA8E-CBD2EB09EA08 Q21145680-C818A714-49B6-45DD-B348-D59D31F5E545 Q24614831-A4199139-AFE5-4E9B-80B5-DED1751A84C4 Q24628703-AEDA6330-9EE0-413F-A856-9F0A6C4A695D Q30376753-BA601470-73CA-44F0-9644-C37B8561E5E8 Q33266468-1285C921-63EF-4DEA-94D1-6A0787160710 Q33393989-2F1EA6B6-1E6D-4398-BCD2-62C70C9C4A0A Q33633731-6C887550-4346-4D2B-9497-BAEB402F68C8 Q33759251-BB0E478B-B41B-4DC6-A215-D009F74DB3AD Q33787500-9CA95D42-12ED-4E79-BFED-0887F05B2609 Q34154787-CF3273FB-B513-47A4-8692-6F700D03DEFC Q34173095-815B650F-A326-4090-B4C6-6465A8A18AEA Q34173989-1BF412C6-F2EB-4449-A9D1-E0610AFD6B74 Q34186907-F31E95A0-B97B-4E3A-AB6E-821FF196C068 Q34565376-77163690-FC44-4789-8855-7DD207D39D0C Q35118996-DD58F94A-9497-4EE7-B403-6796944CACBD Q35214509-76585E89-153F-4086-8D45-E413F1098BCB Q35215270-6EB059B2-4976-43F4-B214-D473C04B4590 Q35376368-E094A76F-9074-4AAB-8F79-ECD4AD8E2E01 Q35608365-64962827-9242-4F8B-87D0-80232462D05C Q36152846-202ECA58-3CF3-43BE-A25A-BF0797907593 Q36955035-FC1D2ADC-088B-4597-90A0-A61959CF983D Q37221444-DA519B27-DF1A-4CF7-8079-9649E56049AA Q37293854-A2B871EB-085D-449D-9116-401D913E432C Q37661971-454231D1-D619-4719-B0E0-44A94C0CE511 Q39972177-224E4CDE-CC96-4338-AE11-2BD192ACF9BB Q40836533-7558DFA0-E5DE-4456-B4A3-6416EC9629D6 Q41105808-807661D0-FE37-4167-9562-1D0317940024 Q41506164-DE18A60B-70E8-4FE6-94D3-2C1BCB6C00ED Q42647479-90CB0699-8E49-48B0-9202-533A6A20C1D3 Q43872323-8C1C7721-7B9B-461C-ABC9-1308749A3305 Q44615124-891CC0E0-A887-44E9-8871-DBB043D3FDAC Q51127920-AE03CEBC-24BA-4679-A7A9-A171668CAF35 Q51870410-C0556575-4BD9-4A1E-A832-21786BA21888 Q52604626-20D01F5F-0E99-4CB0-A25F-279BD6CC012D

P2860

A gold standard set of mechanistically diverse enzyme superfamilies.

http://www.wikidata.org/entity/Q21184154

description

2006 nî lūn-bûn

@nan

2006 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2006 թվականի հունվարին հրատարակված գիտական հոդված

@hy

2006年の論文

@ja

2006年論文

@yue

2006年論文

@zh-hant

2006年論文

@zh-hk

2006年論文

@zh-mo

2006年論文

@zh-tw

2006年论文

@wuu

name

A gold standard set of mechanistically diverse enzyme superfamilies

@nl

A gold standard set of mechanistically diverse enzyme superfamilies.

@ast

A gold standard set of mechanistically diverse enzyme superfamilies.

@en

A gold standard set of mechanistically diverse enzyme superfamilies.

@en-gb

type

label

A gold standard set of mechanistically diverse enzyme superfamilies

@nl

A gold standard set of mechanistically diverse enzyme superfamilies.

@ast

A gold standard set of mechanistically diverse enzyme superfamilies.

@en

A gold standard set of mechanistically diverse enzyme superfamilies.

@en-gb

prefLabel

A gold standard set of mechanistically diverse enzyme superfamilies

@nl

A gold standard set of mechanistically diverse enzyme superfamilies.

@ast

A gold standard set of mechanistically diverse enzyme superfamilies.

@en

A gold standard set of mechanistically diverse enzyme superfamilies.

@en-gb

P1433

Q21184154-4069D73D-2BB6-49B0-9049-B4BC8A008E02

P1476

Q21184154-77BB136E-697D-4208-B707-C282973AA172

P2093

Q21184154-4608610F-04FC-43F1-A28C-0CCD9060875D

Q21184154-87ED1034-D936-4D71-AF68-3316AA283E66

Q21184154-908151BB-67C7-45FE-9330-AEADB3CE2EEB

P2860

Q21184154-0A4132F0-3C63-42DC-955A-6E1F7947D064

Q21184154-16EA11CD-38F1-4209-8463-D87EE25CB999

Q21184154-1BD0C1EA-1085-40CA-A51C-7D12560566E3

Q21184154-1E678C92-9B0C-486D-9CD6-FD3D4AFD68D6

Q21184154-1F7566E6-5B88-4E8D-9394-70A9B9E9237B

Q21184154-242DA317-2B19-49B3-917F-9E6112446A75

Q21184154-2A9146AC-32A0-41D9-9920-07DDAA60F261

Q21184154-3A484612-1153-4767-8FAC-216AA3582975

Q21184154-467E7C85-A06E-4854-A2AB-4C5BE2FF8E8F

Q21184154-4754D70E-F063-4448-8B90-E8D3DC3700F6

P2888

Q21184154-912E5073-2E20-4F79-A134-7E359BECB400

P304

Q21184154-B57B6753-ECAA-4E3C-A7E7-B3193C2F5F66

P31

Q21184154-78C52E9D-DC2F-4F71-8A78-44B1E2C5A7FD

P3181

Q21184154-062B8AC2-A0FC-4832-891D-1C4C0BB308C2

P356

Q21184154-F3634CAC-ED4D-4DDC-A6F9-1EC40D248D17

P407

Q21184154-B931D0BF-94FF-47BD-A57C-471D0E2083A6

P433

Q21184154-8D2FE36E-50BE-4378-93AD-1F491E4E55CA

P478

Q21184154-E3112158-8816-44A5-AA46-07ABA5FEC803

P50

Q21184154-FDEBA948-8385-419B-87FA-A8E40D5E78A2

P577

Q21184154-2A6D3B69-78DF-4CE3-9DC8-826EE6832D5E

P5875

Q21184154-3C3E4810-E2F1-49A2-8182-1AD5F751E9D7

P6179

Q21184154-50347931-9C54-423E-9F93-57BFAE140723

P698

Q21184154-E71001F8-833D-4E56-A140-6AF465827B6E

P932

Q21184154-8F4613F5-0481-40E6-B446-8EF285411750

P3181

P356

P1433

P1476

A gold standard set of mechanistically diverse enzyme superfamilies.

@en

P2093

Jennifer L Seffernick

http://www.w3.org/2001/XMLSchema#string

John A Gerlt

http://www.w3.org/2001/XMLSchema#string

Shoshana D Brown

http://www.w3.org/2001/XMLSchema#string

P2860

On the Evolution of Biochemical Syntheses

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Melamine deaminase and atrazine chlorohydrolase: 98 percent identical but functionally different

The Universal Protein Resource (UniProt)

The Pfam protein families database

The ProDom database of protein domain families: more emphasis on 3D

SCOP: a structural classification of proteins database for the investigation of sequences and structures

An efficient algorithm for large-scale detection of protein families

The relationship between protein structure and function: a comprehensive survey with application to the yeast genome

Divergent evolution of enzymatic function: mechanistically diverse superfamilies and functionally distinct suprafamilies

P2888

P304

R8

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

3615186

http://www.w3.org/2001/XMLSchema#string

P356

10.1186/GB-2006-7-1-R8

http://www.w3.org/2001/XMLSchema#string

P407

P433

1

http://www.w3.org/2001/XMLSchema#string

P478

7

http://www.w3.org/2001/XMLSchema#string

P50

Patricia Babbitt

P577

2006-01-31T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

7270904

http://www.w3.org/2001/XMLSchema#string

P6179

1028567887

http://www.w3.org/2001/XMLSchema#string

P698

16507141

http://www.w3.org/2001/XMLSchema#string

P932

1431709

http://www.w3.org/2001/XMLSchema#string