READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
about
Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulationDual RNA-seq unveils noncoding RNA functions in host–pathogen interactionsFunctional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infectionRole of oxygen and the OxyR protein in the response to iron limitation in Rhodobacter sphaeroidesGenome-wide transcription start site profiling in biofilm-grown Burkholderia cenocepacia J2315dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42ViennaNGS: A toolbox for building efficient next- generation sequencing analysis pipelinesRNA-seq – Revealing Biological Insights in BacteriaGlobal transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coliGlobal RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivoGrad-seq guides the discovery of ProQ as a major small RNA-binding proteinThe primary transcriptome of the Escherichia coli O104:H4 pAA plasmid and novel insights into its virulence gene expression and regulationsRNA154 a newly identified regulator of nitrogen fixation in Methanosarcina mazei strain Gö1Transcription Profiling of Bacillus subtilis Cells Infected with AR9, a Giant Phage Encoding Two Multisubunit RNA PolymerasesGenome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq)Effect of Shear Stress on Pseudomonas aeruginosaIsolated from the Cystic Fibrosis Lungcis-Encoded Small RNAs, a Conserved Mechanism for Repression of Polysaccharide Utilization in BacteroidesPhenotypic Heterogeneity Affects Stenotrophomonas maltophilia K279a Colony Morphotypes and β-Lactamase ExpressionPrimary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensisFuture opportunities and trends for e-infrastructures and life sciences: going beyond the grid to enable life science data analysisdRNA-seq transcriptional profiling of the FK506 biosynthetic gene cluster in Streptomyces tsukubaensis NRRL18488 and general analysis of the transcriptomeAn RpoHI-Dependent Response Promotes Outgrowth after Extended Stationary Phase in the Alphaproteobacterium Rhodobacter sphaeroidesToNER: A tool for identifying nucleotide enrichment signals in feature-enriched RNA-seq dataTranscriptome-Wide Identification of Hfq-Associated RNAs in Brucella suis by Deep Sequencing.SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome AnalysisResolving host-pathogen interactions by dual RNA-seq.Analysis of host microRNA function uncovers a role for miR-29b-2-5p in Shigella capture by filopodia.Characterisation of worldwide Helicobacter pylori strains reveals genetic conservation and essentiality of serine protease HtrA.Chlamydia preserves the mitochondrial network necessary for replication via microRNA-dependent inhibition of fission.Quantitative bacterial transcriptomics with RNA-seq.Identification of the RNA Pyrophosphohydrolase RppH of Helicobacter pylori and Global Analysis of Its RNA Targets.Insights into Microalga and Bacteria Interactions of Selected Phycosphere Biofilms Using Metagenomic, Transcriptomic, and Proteomic Approaches.dRNA-seq implicates sulfide as master regulator of S(0) metabolism in Chlorobaculum tepidum and other green sulfur bacteria.RNA Sequencing and Analysis in Microorganisms for Metabolic Network Reconstruction.A Novel Mechanism of Inactivating Antibacterial Nitro Compounds in the Human Pathogen Staphylococcus aureus by Overexpression of a NADH-Dependent Flavin Nitroreductase.CRISPR RNA-Dependent Binding and Cleavage of Endogenous RNAs by the Campylobacter jejuni Cas9.The Probiotic Escherichia coli Strain Nissle 1917 Combats Lambdoid Bacteriophages stx and λ.ANNOgesic: a Swiss army knife for the RNA-seq based annotation of bacterial/archaeal genomes
P2860
Q24247657-233b1b3e-484f-e4a0-1ff8-44d7fe4a02fdQ24285722-948c4040-4ee7-85d7-4307-9bb7ebadfb93Q24490032-441ECBD9-EAEB-4010-9ED5-BA69C339157BQ24490066-67d0774f-43b6-daa9-b76d-6da462594b87Q24490201-82D8DFEC-6F8D-4E88-8C4C-AEC55747617CQ24490214-8206B1C9-CD23-4188-BF5D-9497558545EBQ24490324-0e2c382b-4da3-1bd1-fc91-aac443d1baa4Q24490330-3526418a-40b0-45a7-8043-1b319c5bc659Q24490458-d173d4b2-412a-3fa5-f6ba-56929dbfbb3eQ24490554-8b83999a-4538-469d-1b16-60b5a2914d8dQ27243322-CCDB3067-F0F1-42BF-8616-B4DCE90D03E3Q27977592-43CA7975-5FBB-4E11-9EDC-A38FE48F6791Q30017317-CFC3DCEA-0FD6-4C36-9B53-2EEE7CB1F801Q30017361-0B87A7D5-C353-40D9-AED9-A58D6A3B83EFQ30017423-30669D14-CD37-40AD-AF0A-FFC39390A76EQ30017431-990C5BC7-D6FF-4164-B43C-99340DDD6DB7Q30017448-926AAD10-B3D6-400C-8FB0-8C9AD2CF9D6AQ30017519-0DEB79ED-20EA-444B-B5AD-9324370EE167Q30017682-90B9AC3B-467A-4DA9-AD81-B36FEEDAACD9Q30979394-B88EEA67-D004-435B-A441-12E050008EF1Q33140504-F1753B84-C4F5-4717-9083-D633F8E2F2D3Q33140561-20F49467-6FA0-410A-B76F-C6AA3642AE29Q33728579-23356BE2-3F1D-4F4B-9C95-0FAB5FE136FDQ34501223-20479364-62E0-48CB-8192-23D3071DCEA2Q35915015-468F1E6F-CB06-4877-904A-DEB9E375CDC0Q36282833-2C5C793E-A7F1-4247-9A9A-ADC80992FC20Q36342251-EFE33662-948D-4D8F-8468-7F434E482A3FQ36800042-A0D91137-5986-4E2B-840E-3989441B124BQ37834629-2E60D1BC-FC8E-491D-9D53-62A17689ED89Q38284619-A0BD7051-DC3F-4C2C-8205-6FB73C4E41DCQ40409846-C09FE9EE-C985-4D6C-8E96-6007629421C9Q42700509-104001BC-05C4-4507-9CE9-343F55371E17Q47336496-DD690BB4-F003-44C8-AAD1-FE62CBBBA875Q47339198-273BC539-7BFA-4A52-9564-E6C7E5B6804CQ50042586-8D6A4C35-87ED-473B-B2DD-80E8ED8DD3D0Q52430557-3CB232F4-6546-4872-9765-A897FA9E2598Q55022785-A4A4C3E3-1CC9-41D8-92C3-87DED357DDF0Q57344156-A500C1D0-B554-4D7D-AFCC-AD8BFA9540C4
P2860
READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
description
2014 nî lūn-bûn
@nan
2014 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2014 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
2014年の論文
@ja
2014年論文
@yue
2014年論文
@zh-hant
2014年論文
@zh-hk
2014年論文
@zh-mo
2014年論文
@zh-tw
2014年论文
@wuu
name
READemption-a tool for the com ...... ncing-based transcriptome data
@ast
READemption-a tool for the com ...... ncing-based transcriptome data
@en
READemption-a tool for the com ...... ncing-based transcriptome data
@en-gb
type
label
READemption-a tool for the com ...... ncing-based transcriptome data
@ast
READemption-a tool for the com ...... ncing-based transcriptome data
@en
READemption-a tool for the com ...... ncing-based transcriptome data
@en-gb
prefLabel
READemption-a tool for the com ...... ncing-based transcriptome data
@ast
READemption-a tool for the com ...... ncing-based transcriptome data
@en
READemption-a tool for the com ...... ncing-based transcriptome data
@en-gb
P2860
P50
P3181
P356
P1433
P1476
READemption-a tool for the com ...... ncing-based transcriptome data
@en
P2860
P304
P3181
P356
10.1093/BIOINFORMATICS/BTU533
P407
P577
2014-12-01T00:00:00Z