Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli - Wikidata - wikimedia - TriplyDB

Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli

Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli

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Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42 Gas Fermentation-A Flexible Platform for Commercial Scale Production of Low-Carbon-Fuels and Chemicals from Waste and Renewable Feedstocks Initial events in bacterial transcription initiation The primary transcriptome of the Escherichia coli O104:H4 pAA plasmid and novel insights into its virulence gene expression and regulation Regulatory RNAs in photosynthetic cyanobacteria Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq)An automated approach for global identification of sRNA-encoding regions in RNA-Seq data from Mycobacterium tuberculosis.Landscape of RNA polyadenylation in E. coli.ToNER: A tool for identifying nucleotide enrichment signals in feature-enriched RNA-seq data A Dual Luciferase Reporter System for B. burgdorferi Measures Transcriptional Activity during Tick-Pathogen Interactions The primary transcriptome of Neisseria meningitidis and its interaction with the RNA chaperone Hfq.Differential expression of small RNAs under chemical stress and fed-batch fermentation in E. coli.Transcriptome landscape of Lactococcus lactis reveals many novel RNAs including a small regulatory RNA involved in carbon uptake and metabolism.Protection against deleterious nitrogen compounds: role of σS-dependent small RNAs encoded adjacent to sdiA.GenoBase: comprehensive resource database of Escherichia coli K-12 Advanced biotechnology: metabolically engineered cells for the bio-based production of chemicals and fuels, materials, and health-care products.Massively Systematic Transcript End Readout, "MASTER": Transcription Start Site Selection, Transcriptional Slippage, and Transcript Yields.Antisense transcription as a tool to tune gene expression H-NS Facilitates Sequence Diversification of Horizontally Transferred DNAs during Their Integration in Host Chromosomes.DNA Replication Control Is Linked to Genomic Positioning of Control Regions in Escherichia coli.Temperature-dependent sRNA transcriptome of the Lyme disease spirochete.RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond.A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome Open complex scrunching before nucleotide addition accounts for the unusual transcription start site of E. coli ribosomal RNA promoters.Haemophilus ducreyi Seeks Alternative Carbon Sources and Adapts to Nutrient Stress and Anaerobiosis during Experimental Infection of Human Volunteers.Coexpression of Escherichia coli obgE, Encoding the Evolutionarily Conserved Obg GTPase, with Ribosomal Proteins L21 and L27 Differential Gene Expression of Three Mastitis-Causing Escherichia coli Strains Grown under Planktonic, Swimming, and Swarming Culture Conditions.In vivo expression technology and 5' end mapping of the Borrelia burgdorferi transcriptome identify novel RNAs expressed during mammalian infection.Genome-wide transcription-coupled repair in Escherichia coli is mediated by the Mfd translocase.Global mapping transcriptional start sites revealed both transcriptional and post-transcriptional regulation of cold adaptation in the methanogenic archaeon Methanolobus psychrophilus Quantitative bacterial transcriptomics with RNA-seq.Characterization of a minimal type of promoter containing the -10 element and a guanine at the -14 or -13 position in mycobacteria.Both MisR (CpxR) and MisS (CpxA) Are Required for Neisseria gonorrhoeae Infection in a Murine Model of Lower Genital Tract Infection.Stressing Escherichia coli to educate students about research: A CURE to investigate multiple levels of gene regulation.Genome-wide identification and characterization of small RNAs in Rhodobacter capsulatus and identification of small RNAs affected by loss of the response regulator CtrA.Global Transcriptional Responses to Osmotic, Oxidative, and Imipenem Stress Conditions in Pseudomonas putida The role of repressor kinetics in relief of transcriptional interference between convergent promoters.Natural antisense RNAs as mRNA regulatory elements in bacteria: a review on function and applications.

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Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli

http://www.wikidata.org/entity/Q24490458

description

2015 nî lūn-bûn

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2015 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2015 թվականի հունվարին հրատարակված գիտական հոդված

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2015年の論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年论文

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name

Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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type

label

Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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Journal of Bacteriology

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Global transcriptional start s ...... sense RNAs in Escherichia coli

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P2093

Aixia Zhang

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Gisela Storz

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Kay Nieselt

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Maureen K Thomason

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Sara K Eisenbart

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P2860

Fast mapping of short sequences with mismatches, insertions and deletions using index structures

Mapping and quantifying mammalian transcriptomes by RNA-Seq

READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data

High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates

Small toxic proteins and the antisense RNAs that repress them

S-box and T-box riboswitches and antisense RNA control a sulfur metabolic operon of Clostridium acetobutylicum

Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

MicL, a new σE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein

The primary transcriptome of the major human pathogen Helicobacter pylori

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18-28

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scholarly article

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1710021

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10.1128/JB.02096-14

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1

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197

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Konrad Förstner

Thorsten Bischler

Alexander Herbig

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2015-01-01T00:00:00Z

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266263034

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25266388

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Escherichia coli

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4288677

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