ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks - Wikidata - wikimedia - TriplyDB

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

http://www.wikidata.org/entity/Q24570122

about

An interaction network predicted from public data as a discovery tool: application to the Hsp90 molecular chaperone machine Kiwi genome provides insights into evolution of a nocturnal lifestyle Global Transcriptomic Analysis of Interactions between Pseudomonas aeruginosa and Bacteriophage PaP3 Haem-activated promiscuous targeting of artemisinin in Plasmodium falciparum Zika Virus Depletes Neural Progenitors in Human Cerebral Organoids through Activation of the Innate Immune Receptor TLR3 The functional interactome landscape of the human histone deacetylase family Integrative analysis of high-throughput RNAi screen data identifies the FER and CRKL tyrosine kinases as new regulators of the mitogenic ERK-dependent pathways in transformed cells Bioinformatic analysis reveals the expression of unique transcriptomic signatures in Zika virus infected human neural stem cells Immunoprecipitation and mass spectrometry defines an extensive RBM45 protein-protein interaction network Big Data Analytics in Healthcare.Poly (ADP-ribose) in the pathogenesis of Parkinson's disease Grouping annotations on the subcellular layered interactome demonstrates enhanced autophagy activity in a recurrent experimental autoimmune uveitis T cell line Multi-breed and multi-trait co-association analysis of meat tenderness and other meat quality traits in three French beef cattle breeds.Analysis of differential gene expression and novel transcript units of ovine muscle transcriptomes The alternative splicing factor Nova2 regulates vascular development and lumen formation.Functional and Proteomic Investigations Reveal Major Royal Jelly Protein 1 Associated with Anti-hypertension Activity in Mouse Vascular Smooth Muscle Cells.Cutaneous wound healing through paradoxical MAPK activation by BRAF inhibitors.Identification of novel and differentially expressed MicroRNAs of dairy goat mammary gland tissues using solexa sequencing and bioinformatics Extra-coding RNAs regulate neuronal DNA methylation dynamics Systems Biology-Based Investigation of Cellular Antiviral Drug Targets Identified by Gene-Trap Insertional Mutagenesis Functional and genomic analyses of blocked protein O-mannosylation in baker's yeast.CyTargetLinker: a cytoscape app to integrate regulatory interactions in network analysis Arthrogryposis as a Syndrome: Gene Ontology Analysis The microRNA-183 cluster: the family that plays together stays together A robust tool for discriminative analysis and feature selection in paired samples impacts the identification of the genes essential for reprogramming lung tissue to adenocarcinoma From Proteomic Analysis to Potential Therapeutic Targets: Functional Profile of Two Lung Cancer Cell Lines, A549 and SW900, Widely Studied in Pre-Clinical Research Meta-analysis of transcriptomic responses as a means to identify pulmonary disease outcomes for engineered nanomaterials The IL-4/STAT6 signaling axis establishes a conserved microRNA signature in human and mouse macrophages regulating cell survival via miR-342-3p Using gene expression signatures to identify novel treatment strategies in gulf war illness A new methodology to associate SNPs with human diseases according to their pathway related context Transcriptomic characterization of temperature stress responses in larval zebrafish The identification of pathway markers in intracranial aneurysm using genome-wide association data from two different populations The Dlx5 and Foxg1 transcription factors, linked via miRNA-9 and -200, are required for the development of the olfactory and GnRH system.Exploring pathway interactions in insulin resistant mouse liver Evaluating the pharmacological mechanism of Chinese medicine Si-Wu-Tang through multi-level data integration Separate and combined effects of DNMT and HDAC inhibitors in treating human multi-drug resistant osteosarcoma HosDXR150 cell line Visualized gene network reveals the novel target transcripts Sox2 and Pax6 of neuronal development in trans-placental exposure to bisphenol A Comprehensive Analysis of the Naturally Processed Peptide Repertoire: Differences between HLA-A and B in the Immunopeptidome Involvement of Polycomb Repressive Complex 2 in Maturation of Induced Pluripotent Stem Cells during Reprogramming of Mouse and Human Fibroblasts 5'-Hydroxymethylcytosine Precedes Loss of CpG Methylation in Enhancers and Genes Undergoing Activation in Cardiomyocyte Maturation

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ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

http://www.wikidata.org/entity/Q24570122

description

2009 nî lūn-bûn

@nan

2009 թուականի Ապրիլին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի ապրիլին հրատարակված գիտական հոդված

@hy

2009年の論文

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2009年論文

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2009年論文

@zh-hant

2009年論文

@zh-hk

2009年論文

@zh-mo

2009年論文

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2009年论文

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name

ClueGO: a Cytoscape plug-in to ...... nd pathway annotation networks

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ClueGO: a Cytoscape plug-in to ...... nd pathway annotation networks

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ClueGO: a Cytoscape plug-in to ...... nd pathway annotation networks

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ClueGO: a Cytoscape plug-in to ...... nd pathway annotation networks

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Amos Kirilovsky

http://www.w3.org/2001/XMLSchema#string

Bernhard Mlecnik

http://www.w3.org/2001/XMLSchema#string

Franck Pagès

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Gabriela Bindea

http://www.w3.org/2001/XMLSchema#string

Pornpimol Charoentong

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Wolf-Herman Fridman

http://www.w3.org/2001/XMLSchema#string

Zlatko Trajanoski

http://www.w3.org/2001/XMLSchema#string

P2860

Gene ontology: tool for the unification of biology

Cytoscape: a software environment for integrated models of biomolecular interaction networks

The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists

GoMiner: a resource for biological interpretation of genomic and proteomic data

The KEGG databases at GenomeNet.

BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

The protein information and property explorer: an easy-to-use, rich-client web application for the management and functional analysis of proteomic data

Enrichment or depletion of a GO category within a class of genes: which test?

GOlorize: a Cytoscape plug-in for network visualization with Gene Ontology-based layout and coloring.

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1091-3

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scholarly article

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356309

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10.1093/BIOINFORMATICS/BTP101

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8

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25

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Wolf Hervé Fridman

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2009-04-15T00:00:00Z

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24035121

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19237447

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2666812

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