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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

DOMINE: a comprehensive collection of known and predicted domain-domain interactions

http://www.wikidata.org/entity/Q24610433

about

The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection Popular computational methods to assess multiprotein complexes derived from label-free affinity purification and mass spectrometry (AP-MS) experiments Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review Weighted mutual information analysis substantially improves domain-based functional network models Reconstruction and Application of Protein-Protein Interaction Network Prediction of Protein-Protein Interactions by Evidence Combining Methods An extended network of genomic maintenance in the archaeon Pyrococcus abyssi highlights unexpected associations between eucaryotic homologs Qualitative and Quantitative Protein Complex Prediction Through Proteome-Wide Simulations Park7 interacts with p47(phox) to direct NADPH oxidase-dependent ROS production and protect against sepsis Stringent homology-based prediction of H. sapiens-M. tuberculosis H37Rv protein-protein interactions.iPfam: a database of protein family and domain interactions found in the Protein Data Bank An inter-species protein-protein interaction network across vast evolutionary distance Inferring the Brassica rapa Interactome Using Protein-Protein Interaction Data from Arabidopsis thaliana.Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS.Tissue-aware data integration approach for the inference of pathway interactions in metazoan organisms High-resolution network biology: connecting sequence with function.Stringent DDI-based prediction of H. sapiens-M. tuberculosis H37Rv protein-protein interactions.Changes in the neuropeptide content of Biomphalaria ganglia nervous system following Schistosoma infection PCPPI: a comprehensive database for the prediction of Penicillium-crop protein-protein interactions.ChiPPI: a novel method for mapping chimeric protein-protein interactions uncovers selection principles of protein fusion events in cancer.Exploiting holistic approaches to model specificity in protein phosphorylation Linear motif-mediated interactions have contributed to the evolution of modularity in complex protein interaction networks A disease-drug-phenotype matrix inferred by walking on a functional domain network.3did: a catalog of domain-based interactions of known three-dimensional structure SuSPect: enhanced prediction of single amino acid variant (SAV) phenotype using network features PTIR: Predicted Tomato Interactome Resource.Reconstituting protein interaction networks using parameter-dependent domain-domain interactions Elementary flux modes analysis of functional domain networks allows a better metabolic pathway interpretation.Integrative pathway-based approach for genome-wide association studies: identification of new pathways for rheumatoid arthritis and type 1 diabetes Predicting protein-protein interaction by the mirrortree method: possibilities and limitations IIIDB: a database for isoform-isoform interactions and isoform network modules.Computational prediction of the human-microbial oral interactome.Inferring domain-domain interactions from protein-protein interactions with formal concept analysis Characterizing protein interactions employing a genome-wide siRNA cellular phenotyping screen.Prediction of host - pathogen protein interactions between Mycobacterium tuberculosis and Homo sapiens using sequence motifs DOMMINO: a database of macromolecular interactions.Network-Based Isoform Quantification with RNA-Seq Data for Cancer Transcriptome Analysis.Inference of domain-disease associations from domain-protein, protein-disease and disease-disease relationships.Computational Reconstruction of NFκB Pathway Interaction Mechanisms during Prostate Cancer.IDDI: integrated domain-domain interaction and protein interaction analysis system.

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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

http://www.wikidata.org/entity/Q24610433

description

2011 nî lūn-bûn

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2011 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2011 թվականի հունվարին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

DOMINE: a comprehensive collection of known and predicted domain-domain interactions

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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

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type

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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

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prefLabel

DOMINE: a comprehensive collection of known and predicted domain-domain interactions

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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

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Nucleic Acids Research

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DOMINE: a comprehensive collection of known and predicted domain-domain interactions

@en

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Asba Tasneem

http://www.w3.org/2001/XMLSchema#string

Balaji Raghavachari

http://www.w3.org/2001/XMLSchema#string

Dmitri V Zaykin

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Raja Jothi

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Sailu Yellaboina

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P2860

Inferring protein domain interactions from databases of interacting proteins.

Assembly of cell regulatory systems through protein interaction domains

Domain combinations in archaeal, eubacterial and eukaryotic proteomes

Finding biologically relevant protein domain interactions: conserved binding mode analysis

An integrated approach to the prediction of domain-domain interactions.

Co-evolutionary analysis of domains in interacting proteins reveals insights into domain-domain interactions mediating protein-protein interactions.

Predicting domain-domain interactions using a parsimony approach.

Predicting protein domain interactions from coevolution of conserved regions.

A domain-based approach to predict protein-protein interactions

Reuse of structural domain-domain interactions in protein networks

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scholarly article

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693738

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10.1093/NAR/GKQ1229

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Database issue

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39

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2011-01-01T00:00:00Z

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49640855

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21113022

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3013741

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