SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools - Wikidata - wikimedia - TriplyDB

SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools

SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools

http://www.wikidata.org/entity/Q27499050

about

Logical Modeling and Dynamical Analysis of Cellular Networks Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)JSBML 1.0: providing a smorgasbord of options to encode systems biology models.ZBIT Bioinformatics Toolbox: A Web-Platform for Systems Biology and Expression Data Analysis.Data for the qualitative modeling of the osmotic stress response to NaCl in Escherichia coli.Anti-inflammatory effects of reactive oxygen species - a multi-valued logical model validated by formal concept analysis.Design, Assessment, and in vivo Evaluation of a Computational Model Illustrating the Role of CAV1 in CD4(+) T-lymphocytes.Improving collaboration by standardization efforts in systems biology.Phosphoproteomic analyses reveal novel cross-modulation mechanisms between two signaling pathways in yeast BioPreDyn-bench: a suite of benchmark problems for dynamic modelling in systems biology.Integrating interactive computational modeling in biology curricula.Causal biological network database: a comprehensive platform of causal biological network models focused on the pulmonary and vascular systems Iron acquisition and oxidative stress response in aspergillus fumigatus.Dynamical modeling of uncertain interaction-based genomic networks.SBMLsqueezer 2: context-sensitive creation of kinetic equations in biochemical networks.FlexFlux: combining metabolic flux and regulatory network analyses CABeRNET: a Cytoscape app for augmented Boolean models of gene regulatory NETworks Qualitative dynamics semantics for SBGN process description.Modelling with ANIMO: between fuzzy logic and differential equations.Analysis of a dynamic model of guard cell signaling reveals the stability of signal propagation PyBoolNet: a python package for the generation, analysis and visualization of boolean networks.Mackinac: a bridge between ModelSEED and COBRApy to generate and analyze genome-scale metabolic models.Robustness analysis of the detailed kinetic model of an ErbB signaling network by using dynamic sensitivity.A Six-Stage Workflow for Robust Application of Systems Pharmacology.Cyrface: An interface from Cytoscape to R that provides a user interface to R packages.Logic Modeling in Quantitative Systems Pharmacology.Molecular Network Dynamics of Cell Cycle Control: Periodicity of Start and Finish.Advanced Boolean modeling of biological networks applied to systems pharmacology.Boolean modeling techniques for protein co-expression networks in systems medicine.Identification of bifurcation transitions in biological regulatory networks using Answer-Set Programming.Systems biology investigation of cAMP modulation to increase SMN levels for the treatment of spinal muscular atrophy An Extended, Boolean Model of the Septation Initiation Network in S.Pombe Provides Insights into Its Regulation.Advances on plant-pathogen interactions from molecular toward systems biology perspectives.Synergy-COPD: a systems approach for understanding and managing chronic diseases.Symmetry structure in discrete models of biochemical systems: natural subsystems and the weak control hierarchy in a new model of computation driven by interactions.Conceptual and computational framework for logical modelling of biological networks deregulated in diseases.MaBoSS 2.0: an environment for stochastic Boolean modeling.Progress in Mathematical Modeling of Gastrointestinal Slow Wave Abnormalities.Control of primary metabolism by a virulence regulatory network promotes robustness in a plant pathogen.Cooperative development of logical modelling standards and tools with CoLoMoTo.

P2860

Q26745955-570B265C-A3F7-42E8-94FE-B19DB9DE28AC Q28656326-048BF665-DDC5-4AF9-9DE5-4DF300AE6512 Q30316452-85D9D0A2-5642-4CA5-B600-7985B1EE0A83 Q31046381-ADCBA3FF-BAF5-44C1-BEA4-FB553B7CEB7E Q31138158-4377592A-C31F-4B21-9D18-0D6F365DA745 Q34499579-B6B65C15-099B-420D-B159-73928785F91B Q34637731-1E8FCB14-8809-46F2-9C79-B3F2A4EBE88B Q34652065-A6EFEB66-F4F1-4371-8302-FD5EAC5BC32C Q34990551-EAB16FD2-F0F7-43B5-A6F7-B4F7CF79D829 Q35127856-AD9F172E-2F04-4D81-B0DB-AF67FCF91FC9 Q35196586-C9F590FC-098C-43FA-8897-03E61E78F3C7 Q35460455-6E36294B-770D-409E-A6F9-6C8DFFB5A6ED Q35564404-C709E27B-9CF9-4C9D-9AB0-51D7075A0E62 Q35794214-8844A711-03F6-4228-AE31-1D0E2AA3E1D9 Q35802135-54E2F046-7122-4A6C-9283-7F41A9CC17F6 Q35868540-CFDECCE2-1C9F-44A2-90C2-78F8C251B86E Q35914932-D0C7D83C-6E82-4DB2-8A8B-FF92EAE11057 Q36053348-803925DD-5971-41B3-A398-5CD9C1D74EAC Q36086327-AD7B20E7-9C23-4BB6-A518-AF599BB073D9 Q36107983-154EBEE4-596C-4EB7-AE31-9E0D50171822 Q36178401-37351D33-42AA-4669-ABC4-F52C99453230 Q36335554-D17CB3D4-E7F2-40AD-B1BB-BDE7FEECBD09 Q36380876-6329BC6A-BA5C-418B-B7A6-8E97458F5C36 Q36933677-C6534D3C-A147-417D-8770-45DB77AB0AC3 Q38390303-BEBBBF1B-921F-4FCC-A81B-1CA83FF262F4 Q38691620-E0D22738-D2F1-4469-9131-EC9D0F3E2D37 Q38999366-6BC24BD0-7DE3-4214-BDD1-64E61D10172E Q39028504-05B6F47D-F2D8-4036-9250-CB624233F502 Q39830074-6767E321-74BF-4144-9602-463150105D87 Q41080260-022A364A-9241-4E33-80CB-53C70FAC6642 Q41683448-44728B21-AC97-4503-872F-A9F69FC7192A Q41883136-3F0C2D56-FAC7-4FD0-B987-96092F947581 Q42334313-EDE0666A-EBA2-4FA9-B524-1827EED18752 Q43055273-A04D4603-2C05-4B26-9126-F96B25501439 Q44896208-394A54A2-77DA-4BEF-8309-8F3FFEFB37A6 Q47316698-CA90B5AC-7F53-4AE0-A0FC-FC502F7D51FF Q47322508-3C2378FB-66AF-4546-B0D7-8A92DD2999BD Q47555126-F64855D9-31CC-4711-87BA-A58C2E267236 Q48147216-D2835B47-0C84-4822-8A3F-BEA4B20CB63B Q48621887-E72ED7F4-D508-40D7-B2BA-A2397A6379A5

P2860

SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools

http://www.wikidata.org/entity/Q27499050

description

2013 nî lūn-bûn

@nan

2013 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2013 թվականի դեկտեմբերին հրատարակված գիտական հոդված

@hy

2013年の論文

@ja

2013年論文

@yue

2013年論文

@zh-hant

2013年論文

@zh-hk

2013年論文

@zh-mo

2013年論文

@zh-tw

2013年论文

@wuu

name

SBML qualitative models: a mod ...... modelling formalisms and tools

@ast

SBML qualitative models: a mod ...... modelling formalisms and tools

@en

SBML qualitative models: a mod ...... modelling formalisms and tools

@nl

type

label

SBML qualitative models: a mod ...... modelling formalisms and tools

@ast

SBML qualitative models: a mod ...... modelling formalisms and tools

@en

SBML qualitative models: a mod ...... modelling formalisms and tools

@nl

prefLabel

SBML qualitative models: a mod ...... modelling formalisms and tools

@ast

SBML qualitative models: a mod ...... modelling formalisms and tools

@en

SBML qualitative models: a mod ...... modelling formalisms and tools

@nl

P1433

Q27499050-59BD2305-B81A-4CAD-85E6-2440DD2D61B0

P1476

Q27499050-7F6FFFD0-E185-46F9-B345-430C3C238485

P2093

Q27499050-15870292-5FAD-403C-846C-80B48EED574A

Q27499050-1C7E84CE-C43C-4A16-82DF-E65FD4837A0E

Q27499050-1C7FD97E-AF33-495A-9DB3-7CB910C8CF67

Q27499050-6BD10713-FF32-4E7B-B57F-17C3EDB5FE86

Q27499050-6EB6DAB2-4A55-446E-9719-97ADBAC548E0

Q27499050-77F26F7A-0B59-421B-93EB-3D3056CE1864

P2860

Q27499050-030325DE-1A20-4BEC-96F8-40C956AD871D

Q27499050-0360E045-103F-4279-9B4E-68C54CBEFE37

Q27499050-04673F2B-8A06-473F-B85F-7F5CACD98FB2

Q27499050-08C046BD-FBAB-42B6-9EB8-CCA81AE84818

Q27499050-0C64E006-F81B-408E-949D-D65532908159

Q27499050-0D0F7CEC-EF87-4053-9D28-AA54D9C5BCC7

Q27499050-0E09E9D5-AA21-4A27-A383-80CE8FB06EA8

Q27499050-0EA4055A-6232-4C08-A5DA-CFF6D655E62E

Q27499050-0EFAF06D-26D1-4964-9189-8F30620AB859

Q27499050-10DF2B46-37FE-48DA-BB57-C063BC91DEC8

P2888

Q27499050-0FFE41A6-5229-4B94-85A8-1DF6B93D4184

P304

Q27499050-1014F27D-4259-4286-8A6B-CC72CA974768

P31

Q27499050-16B18D8F-50DD-4FFA-9746-E9DE73D181C7

P3181

Q27499050-D8F4165E-263B-48AB-8035-42C1AF545BD4

P356

Q27499050-4234574C-0020-4333-9356-FCA19D522FB0

P433

Q27499050-47611596-0126-4D20-8461-9039014F4965

P478

Q27499050-B87E03A9-F8E1-4160-9B26-4CD9CED49E74

P50

Q27499050-0DFAAEBA-2CDB-460F-8011-DA70E74A1BF6

Q27499050-167BF1D2-542C-48FA-B62A-538D66D4D107

Q27499050-1B239BB0-806E-4D5E-88E3-FB64B52F1360

Q27499050-27D03746-45E7-4602-A4E8-512534BCA7D4

Q27499050-30492D3B-9A8C-465B-B6A9-E8B09BE7F83B

Q27499050-370B532C-8143-42D0-B033-A45AFAA20AFB

Q27499050-42B002CB-CD10-4A63-9C5A-3452D40C7E25

Q27499050-4F6B3153-E677-46D2-B359-A5D722E35316

Q27499050-597EBF08-8121-4DD4-8E18-83CE277F3BE9

Q27499050-607461B5-A467-4920-8B95-697229A08DD1

P577

Q27499050-CDA3CD6D-3D94-498B-8AA2-43A02FC047BF

P5875

Q27499050-B474A2FD-95FF-47F2-AA79-67AB55EF1C5E

P6179

Q27499050-DCFBC38A-35DE-4292-BA84-FBF57C00150C

P698

Q27499050-01299B41-3C49-4C88-8187-4EDDDC397466

P818

Q27499050-9DE3AD0B-50EE-483C-8B2F-9644ADB7C12F

P921

Q27499050-60A34470-4A15-4CE8-8B71-88DCBDC589AF

Q27499050-648D52B5-D65D-4ACB-9D42-2F05E093684A

Q27499050-EDC22E80-58CE-46A7-ADF2-29B60DC797E3

P932

Q27499050-88362FB3-AE84-4E8B-96FF-639D719F1752

P3181

P356

1752-0509-7-135

P1433

BMC Systems Biology

P1476

SBML qualitative models: a mod ...... modelling formalisms and tools

@en

P2093

Axel von Kamp

http://www.w3.org/2001/XMLSchema#string

Benjamin Wicks

http://www.w3.org/2001/XMLSchema#string

Bryan Kowal

http://www.w3.org/2001/XMLSchema#string

Duncan Bérenguier

http://www.w3.org/2001/XMLSchema#string

Hidde de Jong

http://www.w3.org/2001/XMLSchema#string

Michel Page

http://www.w3.org/2001/XMLSchema#string

P2860

Minimum Information About a Simulation Experiment (MIASE)

Reproducible computational biology experiments with SED-ML--the Simulation Experiment Description Markup Language

Structural and functional analysis of cellular networks with CellNetAnalyzer

Precise generation of systems biology models from KEGG pathways

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

Validation of qualitative models of genetic regulatory networks by model checking: analysis of the nutritional stress response in Escherichia coli

A cell simulator platform: the cell collective

Boolean network model predicts cell cycle sequence of fission yeast

Mathematical modelling of cell-fate decision in response to death receptor engagement

Ergodic sets as cell phenotype of budding yeast cell cycle

P2888

1752-0509-7-135

P304

135

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

714026

http://www.w3.org/2001/XMLSchema#string

P356

10.1186/1752-0509-7-135

http://www.w3.org/2001/XMLSchema#string

P433

1

http://www.w3.org/2001/XMLSchema#string

P478

7

http://www.w3.org/2001/XMLSchema#string

P50

Nicolas Le Novère

Martijn P van Iersel

Claudine Chaouiya

Tomáš Helikar

Emanuel Gonçalves

Julio Saez-Rodriguez

Ioannis Xenarios

P577

2013-12-10T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

259252062

http://www.w3.org/2001/XMLSchema#string

P6179

1051459815

http://www.w3.org/2001/XMLSchema#string

P698

24321545

http://www.w3.org/2001/XMLSchema#string

P818

1309.1910

http://www.w3.org/2001/XMLSchema#string

P921

applied mathematics

structural biology

P932

3892043

http://www.w3.org/2001/XMLSchema#string