SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
about
Logical Modeling and Dynamical Analysis of Cellular NetworksMeeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)JSBML 1.0: providing a smorgasbord of options to encode systems biology models.ZBIT Bioinformatics Toolbox: A Web-Platform for Systems Biology and Expression Data Analysis.Data for the qualitative modeling of the osmotic stress response to NaCl in Escherichia coli.Anti-inflammatory effects of reactive oxygen species - a multi-valued logical model validated by formal concept analysis.Design, Assessment, and in vivo Evaluation of a Computational Model Illustrating the Role of CAV1 in CD4(+) T-lymphocytes.Improving collaboration by standardization efforts in systems biology.Phosphoproteomic analyses reveal novel cross-modulation mechanisms between two signaling pathways in yeastBioPreDyn-bench: a suite of benchmark problems for dynamic modelling in systems biology.Integrating interactive computational modeling in biology curricula.Causal biological network database: a comprehensive platform of causal biological network models focused on the pulmonary and vascular systemsIron acquisition and oxidative stress response in aspergillus fumigatus.Dynamical modeling of uncertain interaction-based genomic networks.SBMLsqueezer 2: context-sensitive creation of kinetic equations in biochemical networks.FlexFlux: combining metabolic flux and regulatory network analysesCABeRNET: a Cytoscape app for augmented Boolean models of gene regulatory NETworksQualitative dynamics semantics for SBGN process description.Modelling with ANIMO: between fuzzy logic and differential equations.Analysis of a dynamic model of guard cell signaling reveals the stability of signal propagationPyBoolNet: a python package for the generation, analysis and visualization of boolean networks.Mackinac: a bridge between ModelSEED and COBRApy to generate and analyze genome-scale metabolic models.Robustness analysis of the detailed kinetic model of an ErbB signaling network by using dynamic sensitivity.A Six-Stage Workflow for Robust Application of Systems Pharmacology.Cyrface: An interface from Cytoscape to R that provides a user interface to R packages.Logic Modeling in Quantitative Systems Pharmacology.Molecular Network Dynamics of Cell Cycle Control: Periodicity of Start and Finish.Advanced Boolean modeling of biological networks applied to systems pharmacology.Boolean modeling techniques for protein co-expression networks in systems medicine.Identification of bifurcation transitions in biological regulatory networks using Answer-Set Programming.Systems biology investigation of cAMP modulation to increase SMN levels for the treatment of spinal muscular atrophyAn Extended, Boolean Model of the Septation Initiation Network in S.Pombe Provides Insights into Its Regulation.Advances on plant-pathogen interactions from molecular toward systems biology perspectives.Synergy-COPD: a systems approach for understanding and managing chronic diseases.Symmetry structure in discrete models of biochemical systems: natural subsystems and the weak control hierarchy in a new model of computation driven by interactions.Conceptual and computational framework for logical modelling of biological networks deregulated in diseases.MaBoSS 2.0: an environment for stochastic Boolean modeling.Progress in Mathematical Modeling of Gastrointestinal Slow Wave Abnormalities.Control of primary metabolism by a virulence regulatory network promotes robustness in a plant pathogen.Cooperative development of logical modelling standards and tools with CoLoMoTo.
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P2860
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
description
2013 nî lūn-bûn
@nan
2013 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
SBML qualitative models: a mod ...... modelling formalisms and tools
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SBML qualitative models: a mod ...... modelling formalisms and tools
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SBML qualitative models: a mod ...... modelling formalisms and tools
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type
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SBML qualitative models: a mod ...... modelling formalisms and tools
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SBML qualitative models: a mod ...... modelling formalisms and tools
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SBML qualitative models: a mod ...... modelling formalisms and tools
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SBML qualitative models: a mod ...... modelling formalisms and tools
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SBML qualitative models: a mod ...... modelling formalisms and tools
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SBML qualitative models: a mod ...... modelling formalisms and tools
@nl
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SBML qualitative models: a mod ...... modelling formalisms and tools
@en
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Axel von Kamp
Benjamin Wicks
Bryan Kowal
Duncan Bérenguier
Hidde de Jong
Michel Page
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10.1186/1752-0509-7-135
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2013-12-10T00:00:00Z
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1051459815