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How a DNA Polymerase Clamp Loader Opens a Sliding Clamp

How a DNA Polymerase Clamp Loader Opens a Sliding Clamp

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Clamp loader ATPases and the evolution of DNA replication machinery.DNA replication at the single-molecule level Replisome Assembly at Bacterial Chromosomes and Iteron Plasmids Coordinated DNA Replication by the Bacteriophage T4 Replisome Structure of the eukaryotic replicative CMG helicase suggests a pumpjack motion for translocation The hexameric helicase DnaB adopts a nonplanar conformation during translocation.Recognition of SUMO-modified PCNA requires tandem receptor motifs in Srs2 Nucleotide-induced asymmetry within ATPase activator ring drives 54-RNAP interaction and ATP hydrolysis A proposal: Evolution of PCNA's role as a marker of newly replicated DNA Helicase loading at chromosomal origins of replication Biophysical highlights from 54 years of macromolecular crystallography Single-molecule FRET studies of the cooperative and non-cooperative binding kinetics of the bacteriophage T4 single-stranded DNA binding protein (gp32) to ssDNA lattices at replication fork junctions.Structural basis of human PCNA sliding on DNA.Intrinsic stability and oligomerization dynamics of DNA processivity clamps.Kaposi's sarcoma-associated herpesvirus LANA recruits the DNA polymerase clamp loader to mediate efficient replication and virus persistence Ultrafast water dynamics at the interface of the polymerase-DNA binding complex The interplay of primer-template DNA phosphorylation status and single-stranded DNA binding proteins in directing clamp loaders to the appropriate polarity of DNA.Impact of individual proliferating cell nuclear antigen-DNA contacts on clamp loading and function on DNA.The logic of DNA replication in double-stranded DNA viruses: insights from global analysis of viral genomes Loading dynamics of a sliding DNA clamp.Crystal structure of the eukaryotic origin recognition complex.Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15I Structure and mechanism of the ATPase that powers viral genome packaging.Plasmid replication initiator interactions with origin 13-mers and polymerase subunits contribute to strand-specific replisome assembly Dynamics of Open DNA Sliding Clamps.Assembly and subunit stoichiometry of the functional helicase-primase (primosome) complex of bacteriophage T4.ATP binding and hydrolysis-driven rate-determining events in the RFC-catalyzed PCNA clamp loading reaction How a holoenzyme for DNA replication is formed.The β sliding clamp closes around DNA prior to release by the Escherichia coli clamp loader γ complex Stepwise assembly of the human replicative polymerase holoenzyme.The bacterial DnaC helicase loader is a DnaB ring breaker.Replication clamps and clamp loaders.APE2 is required for ATR-Chk1 checkpoint activation in response to oxidative stress.The eukaryotic CMG helicase pumpjack and integration into the replisome.Cryo-EM structure of a helicase loading intermediate containing ORC-Cdc6-Cdt1-MCM2-7 bound to DNA.Is PCNA unloading the central function of the Elg1/ATAD5 replication factor C-like complex?The ATP sites of AAA+ clamp loaders work together as a switch to assemble clamps on DNA Rapid progress of DNA replication studies in Archaea, the third domain of life.Conformational analysis of processivity clamps in solution demonstrates that tertiary structure does not correlate with protein dynamics.Review: The lord of the rings: Structure and mechanism of the sliding clamp loader.

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How a DNA Polymerase Clamp Loader Opens a Sliding Clamp

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2011年の論文

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How a DNA Polymerase Clamp Loader Opens a Sliding Clamp

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Brian A Kelch

http://www.w3.org/2001/XMLSchema#string

Debora L Makino

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Mike O'Donnell

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P2860

Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis.

PHENIX: a comprehensive Python-based system for macromolecular structure solution

Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex

Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage

Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III

Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III

Atomic structure of the clamp loader small subunit from Pyrococcus furiosus

Nucleotide-dependent conformational changes in a protease-associated ATPase HsIU

Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp

Structure of a Sliding Clamp on DNA

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10.1126/SCIENCE.1211884

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