Enzyme Function Initiative-Enzyme Similarity Tool (EFI-EST): A web tool for generating protein sequence similarity networks - Wikidata - wikimedia - TriplyDB

Enzyme Function Initiative-Enzyme Similarity Tool (EFI-EST): A web tool for generating protein sequence similarity networks

Enzyme Function Initiative-Enzyme Similarity Tool (EFI-EST): A web tool for generating protein sequence similarity networks

http://www.wikidata.org/entity/Q28084922

about

Proteins and Their Interacting Partners: An Introduction to Protein-Ligand Binding Site Prediction Methods Ultrahigh-throughput discovery of promiscuous enzymes by picodroplet functional metagenomics.Rv2074 is a novel F420 H2 -dependent biliverdin reductase in Mycobacterium tuberculosis AGeNNT: annotation of enzyme families by means of refined neighborhood networks.Biocuration in the structure-function linkage database: the anatomy of a superfamily The genomic landscape of ribosomal peptides containing thiazole and oxazole heterocycles.ATP-binding Cassette (ABC) Transport System Solute-binding Protein-guided Identification of Novel d-Altritol and Galactitol Catabolic Pathways in Agrobacterium tumefaciens C58.IspH-RPS1 and IspH-UbiA: "Rosetta Stone" Proteins.Assignment of function to a domain of unknown function: DUF1537 is a new kinase family in catabolic pathways for acid sugars Structure and Function of Four Classes of the 4Fe-4S Protein, IspH.Classification and substrate head-group specificity of membrane fatty acid desaturases.Functional Annotations of Paralogs: A Blessing and a Curse Molecular basis for the broad substrate selectivity of a peptide prenyltransferase.Evolutionary, computational, and biochemical studies of the salicylaldehyde dehydrogenases in the naphthalene degradation pathway.The Escherichia coli COG1738 Member YhhQ Is Involved in 7-Cyanodeazaguanine (preQ₀) Transport.Cytochromes P450 for natural product biosynthesis in Streptomyces: sequence, structure, and function.Evaluating Functional Annotations of Enzymes Using the Gene Ontology.A new genome-mining tool redefines the lasso peptide biosynthetic landscape.Kinetic Mechanism of the Dechlorinating Flavin-dependent Monooxygenase HadA.Ribosomally synthesized and post-translationally modified peptide natural product discovery in the genomic era.Mechanistic Understanding of Lanthipeptide Biosynthetic Enzymes.Convergent evolution of ergothioneine biosynthesis in Cyanobacteria.Chemical transformation of xenobiotics by the human gut microbiota.The methanogenic redox cofactor F420 is widely synthesized by aerobic soil bacteria.Post-translational Claisen Condensation and Decarboxylation en Route to the Bicyclic Core of Pantocin A antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification.Characterization of Chitosan Nanofiber Sheets for Antifungal Application.Structure, Function, and Inhibition of Staphylococcus aureus Heptaprenyl Diphosphate Synthase.Community detection in sequence similarity networks based on attribute clustering.Genomic Enzymology: Web Tools for Leveraging Protein Family Sequence-Function Space and Genome Context to Discover Novel Functions.Biosynthesis of the nosiheptide indole side ring centers on a cryptic carrier protein NosJ.Long-Term Persistence of Bi-functionality Contributes to the Robustness of Microbial Life through Exaptation.GyrI-like proteins catalyze cyclopropanoid hydrolysis to confer cellular protection.A prominent glycyl radical enzyme in human gut microbiomes metabolizes trans-4-hydroxy-l-proline.Biological characterization of the hygrobafilomycin antibiotic JBIR-100 and bioinformatic insights into the hygrolide family of natural products.The Metallophore Staphylopine Enables Staphylococcus aureus To Compete with the Host for Zinc and Overcome Nutritional Immunity.Csl2, a novel chimeric bacteriophage lysin to fight infections caused by Streptococcus suis, an emerging zoonotic pathogen.Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.Structural analyses unravel the molecular mechanism of cyclic di-GMP regulation of bacterial chemotaxis via a PilZ adaptor protein.Integrative View of the Diversity and Evolution of SWEET and SemiSWEET Sugar Transporters.

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Enzyme Function Initiative-Enzyme Similarity Tool (EFI-EST): A web tool for generating protein sequence similarity networks

http://www.wikidata.org/entity/Q28084922

description

2015 nî lūn-bûn

@nan

2015 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2015 թվականի օգոստոսին հրատարակված գիտական հոդված

@hy

2015年の論文

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2015年論文

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2015年論文

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2015年論文

@zh-hk

2015年論文

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2015年論文

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2015年论文

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Enzyme Function Initiative-Enz ...... n sequence similarity networks

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Enzyme Function Initiative-Enz ...... n sequence similarity networks

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Enzyme Function Initiative-Enz ...... n sequence similarity networks

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Enzyme Function Initiative-Enz ...... n sequence similarity networks

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Enzyme Function Initiative-Enz ...... n sequence similarity networks

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Enzyme Function Initiative-Enz ...... n sequence similarity networks

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Enzyme Function Initiative-Enz ...... n sequence similarity networks

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Enzyme Function Initiative-Enz ...... n sequence similarity networks

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J.BBAPAP.2015.04.015

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Biochimica et Biophysica Acta

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Enzyme Function Initiative-Enz ...... n sequence similarity networks

@en

P2093

Daniel B. Davidson

http://www.w3.org/2001/XMLSchema#string

David R. Slater

http://www.w3.org/2001/XMLSchema#string

Jason T. Bouvier

http://www.w3.org/2001/XMLSchema#string

John A. Gerlt

http://www.w3.org/2001/XMLSchema#string

Katie L. Whalen

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P2860

Annotation error in public databases: misannotation of molecular function in enzyme superfamilies

Enzymatic and structural characterization of rTSγ provides insights into the function of rTSβ

The InterPro protein families database: the classification resource after 15 years

Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons

The Enzyme Function Initiative.

Formation and stability of a vinyl carbanion at the active site of orotidine 5'-monophosphate decarboxylase: pKa of the C-6 proton of enzyme-bound UMP

Homologous (beta/alpha)8-barrel enzymes that catalyze unrelated reactions: orotidine 5'-monophosphate decarboxylase and 3-keto-L-gulonate 6-phosphate decarboxylase

Prediction and assignment of function for a divergent N-succinyl amino acid racemase

Structure and Function of YghU, a Nu-Class Glutathione Transferase Related to YfcG from Escherichia coli

Structural and Mechanistic Characterization of l -Histidinol Phosphate Phosphatase from the Polymerase and Histidinol Phosphatase Family of Proteins

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1019-37

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scholarly article

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3566757

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10.1016/J.BBAPAP.2015.04.015

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8

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1854

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P577

2015-08-01T00:00:00Z

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25900361

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4457552

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