Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
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A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structureEvaluation of several lightweight stochastic context-free grammars for RNA secondary structure predictionInferring noncoding RNA families and classes by means of genome-scale structure-based clusteringSimulFold: simultaneously inferring RNA structures including pseudoknots, alignments, and trees using a Bayesian MCMC frameworkViennaRNA Package 2.0Accelerated probabilistic inference of RNA structure evolutionA benchmark of multiple sequence alignment programs upon structural RNAs.Secondary structure models of the 3' untranslated regions of diverse R2 RNAs.Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimizationA comprehensive comparison of comparative RNA structure prediction approachesMSARI: multiple sequence alignments for statistical detection of RNA secondary structureCombinatorial permutation based algorithm for representation of closed RNA secondary structuresTfold: efficient in silico prediction of non-coding RNA secondary structuresRNAstructure: software for RNA secondary structure prediction and analysisTurboKnot: rapid prediction of conserved RNA secondary structures including pseudoknotsMultilign: an algorithm to predict secondary structures conserved in multiple RNA sequencesStructator: fast index-based search for RNA sequence-structure patternsNew families of human regulatory RNA structures identified by comparative analysis of vertebrate genomesIdentification of potential conserved RNA secondary structure throughout influenza A coding regionsCap-independent translational enhancement by the 3' untranslated region of red clover necrotic mosaic virus RNA1RSEARCH: finding homologs of single structured RNA sequencesUnifying evolutionary and thermodynamic information for RNA folding of multiple alignmentsEfficient pairwise RNA structure prediction and alignment using sequence alignment constraintsStructural analysis of aligned RNAsAccurate multiple sequence-structure alignment of RNA sequences using combinatorial optimizationSemiautomated improvement of RNA alignmentsEfficient pairwise RNA structure prediction using probabilistic alignment constraints in DynalignA method for aligning RNA secondary structures and its application to RNA motif detectionA probabilistic model for the evolution of RNA structureEvaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure predictionRNALOSS: a web server for RNA locally optimal secondary structuresThe FOLDALIGN web server for pairwise structural RNA alignment and mutual motif searchStructure Prediction: New Insights into Decrypting Long Noncoding RNAsComputational analysis of noncoding RNAsSearching for IRESEfficient Algorithms for Probing the RNA Mutation LandscapePredicting consensus structures for RNA alignments via pseudo-energy minimizationNMR structure of a 4 x 4 nucleotide RNA internal loop from an R2 retrotransposon: Identification of a three purine-purine sheared pair motif and comparison to MC-SYM predictionsComputational approaches towards understanding human long non-coding RNA biologyFrom consensus structure prediction to RNA gene finding
P2860
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P2860
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
description
2002 nî lūn-bûn
@nan
2002 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2002 թվականի մարտին հրատարակված գիտական հոդված
@hy
2002年の論文
@ja
2002年論文
@yue
2002年論文
@zh-hant
2002年論文
@zh-hk
2002年論文
@zh-mo
2002年論文
@zh-tw
2002年论文
@wuu
name
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@ast
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@en
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@nl
type
label
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@ast
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@en
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@nl
prefLabel
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@ast
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@en
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@nl
P356
P1476
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
@en
P2093
David H Mathews
P304
P356
10.1006/JMBI.2001.5351
P407
P577
2002-03-22T00:00:00Z