An expansive human regulatory lexicon encoded in transcription factor footprints - Wikidata - wikimedia - TriplyDB

An expansive human regulatory lexicon encoded in transcription factor footprints

An expansive human regulatory lexicon encoded in transcription factor footprints

http://www.wikidata.org/entity/Q28274429

about

Chromatin accessibility data sets show bias due to sequence specificity of the DNase I enzyme What does our genome encode?An integrated encyclopedia of DNA elements in the human genome The BEN domain is a novel sequence-specific DNA-binding domain conserved in neural transcriptional repressors EXTREME: an online EM algorithm for motif discovery The accessible chromatin landscape of the human genome Widespread plasticity in CTCF occupancy linked to DNA methylation Genomic regions flanking E-box binding sites influence DNA binding specificity of bHLH transcription factors through DNA shape Exploiting genomics and natural genetic variation to decode macrophage enhancers Minireview: Conversing with chromatin: the language of nuclear receptors "Seq-ing" insights into the epigenetics of neuronal gene regulation Super-enhancers: Asset management in immune cell genomes Next-generation sequencing: a powerful tool for the discovery of molecular markers in breast ductal carcinoma in situ Using the ENCODE Resource for Functional Annotation of Genetic Variants Exploring the effects of polymorphisms on cis-regulatory signal transduction response Genetic code expansion as a tool to study regulatory processes of transcription A brief review on the Human Encyclopedia of DNA Elements (ENCODE) project Enhancer scanning to locate regulatory regions in genomic loci GeNemo: a search engine for web-based functional genomic data.Molecular evolution of multiple-level control of heme biosynthesis pathway in animal kingdom Differential epigenetic reprogramming in response to specific endocrine therapies promotes cholesterol biosynthesis and cellular invasion Genome-wide epigenomic profiling for biomarker discovery The short and long of noncoding sequences in the control of vascular cell phenotypes Protein-DNA binding in high-resolution Setd1a and NURF mediate chromatin dynamics and gene regulation during erythroid lineage commitment and differentiation Lineage-specific genomics: Frequent birth and death in the human genome: The human genome contains many lineage-specific elements created by both sequence and functional turnover Public data and open source tools for multi-assay genomic investigation of disease pENCODE: a plant encyclopedia of DNA elements Data integration in the era of omics: current and future challenges Super-enhancers in the control of cell identity and disease BLUEPRINT: mapping human blood cell epigenomes Human Transcriptome and Chromatin Modifications: An ENCODE Perspective PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants Integrative analysis of 111 reference human epigenomes Genome-wide predictors of NF-κB recruitment and transcriptional activity GEMINI: integrative exploration of genetic variation and genome annotations.Wellington: a novel method for the accurate identification of digital genomic footprints from DNase-seq data.Refined DNase-seq protocol and data analysis reveals intrinsic bias in transcription factor footprint identification.Tissue-aware data integration approach for the inference of pathway interactions in metazoan organisms Identification of active transcriptional regulatory elements from GRO-seq data.

P2860

Q21132673-988833A3-C356-49ED-94CF-BB3DBAA27584 Q22065765-6410D5B2-027E-406D-86A6-8A1627B20578 Q22122150-54F6CEDA-8D7F-4B04-B9DC-D62F89FFF260 Q24323105-57C99ABD-8CC2-4205-A15B-49BB5942D523 Q24564150-54C60E3E-D435-4202-B11D-8640765ED90D Q24595581-0BACFEAF-F883-4314-90A4-695F25E08425 Q24608987-E154AE4B-F2CB-44F8-9535-B857A2078B19 Q24630737-A94EC486-2808-4E5F-A417-2748A141C1D4 Q26825066-BC677F5D-3282-482E-BDA9-AD6CC919C33A Q26829103-936EC221-AFE2-404B-A2A9-D4B3645B3ECE Q26859884-C77557E8-FB34-4762-8FAA-9D13C61C9F12 Q26861020-EE51B948-5868-4D8E-9AC7-B19911BF11F4 Q26864448-62844449-5356-47B2-91DC-DA1ADD7C5BDA Q26865379-08DD05C4-EE71-4583-B030-7AC0816F2120 Q26991710-93ADBF96-01A8-4EC1-8440-5E96FA80A6E0 Q26999463-BFE8A550-4903-48A2-BB9C-8F98EF16BDEB Q27001063-174745E9-5AB3-44FF-8F89-CFD81CD0E08E Q27310315-F0EF3DC9-5148-4D4D-A657-B0391EB7D176 Q27323753-7CF8E1B2-7EDB-4B66-A338-422A9D19A3C9 Q27329732-533F194D-8DC5-483E-AFDD-B08A542C1A77 Q27342622-561A9EBB-8895-4006-BD63-B86579773116 Q28080102-DAA643B2-42E4-4A71-8CEC-DED6B3D757A9 Q28080857-9E0BA22E-5A7A-4E50-A484-D7CC5F2A3DC6 Q28084330-907086C2-92FA-4CA0-8F3C-C03BF9A09DBC Q28117414-AAA426C3-F5E9-4FC5-A1A8-98F022520A27 Q28596126-DDB9E56B-DB77-48EC-9BF3-14A0C9CE5A73 Q28596241-3C7B6757-4C8B-4DB6-B7C6-BB05A21ADB92 Q28635111-2C92626D-B073-46CC-B7F7-6118C4C1AFC1 Q28655601-13F1DEBB-AC16-4D0D-BE46-F920F612BD87 Q28661442-E2699658-5D3A-47AE-9920-AE207C05596E Q28677161-E8AB81E1-35EE-4F33-8FED-D1C85B8B78FF Q28679909-6F73D3E9-0008-4335-983A-62C28CDDBAAD Q28818092-CDF44F06-6401-4235-B098-CB0766DC0BBF Q29615565-693CA4FC-1E7F-46DD-99FC-7F6EDC780443 Q30277994-4EB4A7E2-CE44-4163-9B7C-1A6511D40043 Q30418169-D48525B2-4B17-4A20-AB14-3935679D3673 Q30670345-2521E751-559C-40B9-B2B5-451F6CAF4A3B Q30710808-257A51E9-360E-4F2D-A0B1-500111CABE98 Q30872328-98B576FA-2D4D-4CC2-A420-4CFB396D62FD Q30914286-25903F16-B30C-409F-82CB-6220E4386EC0

P2860

An expansive human regulatory lexicon encoded in transcription factor footprints

http://www.wikidata.org/entity/Q28274429

description

2012 nî lūn-bûn

@nan

2012 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի սեպտեմբերին հրատարակված գիտական հոդված

@hy

2012年の論文

@ja

2012年論文

@yue

2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

@zh-mo

2012年論文

@zh-tw

2012年论文

@wuu

name

An expansive human regulatory lexicon encoded in transcription factor footprints

@ast

An expansive human regulatory lexicon encoded in transcription factor footprints

@en

An expansive human regulatory lexicon encoded in transcription factor footprints

@nl

type

label

An expansive human regulatory lexicon encoded in transcription factor footprints

@ast

An expansive human regulatory lexicon encoded in transcription factor footprints

@en

An expansive human regulatory lexicon encoded in transcription factor footprints

@nl

prefLabel

An expansive human regulatory lexicon encoded in transcription factor footprints

@ast

An expansive human regulatory lexicon encoded in transcription factor footprints

@en

An expansive human regulatory lexicon encoded in transcription factor footprints

@nl

P1433

Q28274429-C157B881-99D1-43EE-BCC9-7CC2C2130299

P1476

Q28274429-9EDDB5F6-264C-48AB-A94F-DE90B6B9874C

P2093

Q28274429-1B4388C3-F2AB-4832-90EA-88117975FFB4

Q28274429-1DE69A7E-B25F-4943-9071-EACE52310127

Q28274429-2391F6C4-27D7-4F18-B459-BA2AC18BBD8A

Q28274429-34402637-2C8D-431B-9FC0-F382CD955566

Q28274429-3C1CD419-35B0-4352-84C8-8ADF53A72B84

Q28274429-3CB91ED1-FD66-4F61-B600-F61690740B8E

Q28274429-5C11E4FB-EFA3-472B-B75C-41DF4752FB8A

Q28274429-5C61A8BF-9CDB-43A2-8706-0FF9D493BC63

Q28274429-5C9DB000-7A5C-4A99-B36B-2BFEC7D75B83

Q28274429-5EBE5EA7-C96C-46C1-B9D4-19D3ABE3EEE8

P2860

Q28274429-00CDEC99-4689-4F90-A574-F2369D9DD10C

Q28274429-0F49232A-7D65-4EFA-A2D8-A62541CFFB0C

Q28274429-181D1ED2-6C62-4B45-B79F-FAF35809C45F

Q28274429-208829E6-440E-401A-94F8-2E8D6FC8DE1D

Q28274429-257DE8A0-DA69-48CA-8B4E-4B9988CA69C5

Q28274429-278474F5-86BF-4B86-B628-379A36D49692

Q28274429-28627406-B43F-4E14-B361-E4BA8277849D

Q28274429-2DBE04CB-8228-421F-9CAA-80D38C4FB087

Q28274429-2E5C0F57-5708-4D56-AD65-527FB7280B56

Q28274429-2F58453F-6FAE-4CAE-A770-9B27F36D49C0

P2888

Q28274429-C50D5873-59EC-4A71-886C-9977CEB311CB

P304

Q28274429-E85D845E-FEB8-4B6B-94BE-B3DBDC42EE7E

P31

Q28274429-36C93898-7C43-414E-9A40-DA25AA95C8BF

P3181

Q28274429-BCD17EEA-93FD-40FB-B8C1-28CEC8E68CB4

P356

Q28274429-4C726C04-1BB3-480F-9A54-75EEAE13F06A

P407

Q28274429-6427FDC8-0245-46F1-A9B3-1DB47BBBFB5E

P433

Q28274429-D72D29E2-DCB0-4CDA-A87A-BDD1475D91F2

P478

Q28274429-9B064F98-D78F-4844-BD9A-F2DEB49BBB2B

P50

Q28274429-29668000-2352-438D-A069-509B65A3DF07

Q28274429-CB9C80CB-9C98-4C68-8E14-24AE48503B5D

Q28274429-DB620460-663E-4FB4-A4BF-1D870E0B5AE3

Q28274429-E569F194-1EA7-44ED-8A1B-3EE60292D763

P577

Q28274429-6A29D1F0-1FED-4D02-914D-822AEA89B0AB

P5875

Q28274429-697CEC8A-68DD-41EE-9613-720BA0333FA6

P6179

Q28274429-BE1B2896-0409-43A3-AE4C-CD3C4C30DFFC

P698

Q28274429-672C7123-65A8-47B5-A307-76B26E44753D

P932

Q28274429-52C1E8BF-726C-439C-AC0F-A3B122627FC2

P3181

P356

P1433

P1476

An expansive human regulatory lexicon encoded in transcription factor footprints

@en

P2093

Alex P Reynolds

http://www.w3.org/2001/XMLSchema#string

Andrew B Stergachis

http://www.w3.org/2001/XMLSchema#string

Anthony Schafer

http://www.w3.org/2001/XMLSchema#string

Audra K Johnson

http://www.w3.org/2001/XMLSchema#string

Benjamin Vernot

http://www.w3.org/2001/XMLSchema#string

Daniel Bates

http://www.w3.org/2001/XMLSchema#string

Douglas Dunn

http://www.w3.org/2001/XMLSchema#string

Eric Rynes

http://www.w3.org/2001/XMLSchema#string

Erika Giste

http://www.w3.org/2001/XMLSchema#string

Gayathri Balasundaram

http://www.w3.org/2001/XMLSchema#string

P2860

An integrated encyclopedia of DNA elements in the human genome

The neuron-restrictive silencer factor (NRSF): a coordinate repressor of multiple neuron-specific genes

Cloning of Nrf1, an NF-E2-related transcription factor, by genetic selection in yeast

The LIM-only protein Lmo2 is a bridging molecule assembling an erythroid, DNA-binding complex which includes the TAL1, E47, GATA-1 and Ldb1/NLI proteins

TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

Mathematical model for studying genetic variation in terms of restriction endonucleases

Structure and function of the b/HLH/Z domain of USF

DNAse footprinting: a simple method for the detection of protein-DNA binding specificity

A map of human genome variation from population-scale sequencing

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

P2888

P304

83-90

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

508019

http://www.w3.org/2001/XMLSchema#string

P356

10.1038/NATURE11212

http://www.w3.org/2001/XMLSchema#string

P407

P433

7414

http://www.w3.org/2001/XMLSchema#string

P478

489

http://www.w3.org/2001/XMLSchema#string

P50

Richard Sandstrom

Michael J MacCoss

P577

2012-09-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

230810978

http://www.w3.org/2001/XMLSchema#string

P6179

1039250372

http://www.w3.org/2001/XMLSchema#string

P698

22955618

http://www.w3.org/2001/XMLSchema#string

P932

3736582

http://www.w3.org/2001/XMLSchema#string