Sub-angstrom accuracy in protein loop reconstruction by robotics-inspired conformational sampling - Wikidata - wikimedia - TriplyDB

Sub-angstrom accuracy in protein loop reconstruction by robotics-inspired conformational sampling

Sub-angstrom accuracy in protein loop reconstruction by robotics-inspired conformational sampling

http://www.wikidata.org/entity/Q28748259

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Modeling large regions in proteins: applications to loops, termini, and folding Computational methods in drug discovery A Mechanism for Tunable Autoinhibition in the Structure of a Human Ca2+/Calmodulin- Dependent Kinase II Holoenzyme Oligomerization Propensity and Flexibility of Yeast Frataxin Studied by X-ray Crystallography and Small-Angle X-ray Scattering The Molecular Basis of Iron-induced Oligomerization of Frataxin and the Role of the Ferroxidation Reaction in Oligomerization Control of protein signaling using a computationally designed GTPase/GEF orthogonal pair Computational Design of a Protein-Based Enzyme Inhibitor Accurate de novo design of hyperstable constrained peptides Constraint methods that accelerate free-energy simulations of biomolecules Advancements in therapeutically targeting orphan GPCRs Lipid receptor S1P₁ activation scheme concluded from microsecond all-atom molecular dynamics simulations Assessment and challenges of ligand docking into comparative models of G-protein coupled receptors PaFlexPepDock: parallel ab-initio docking of peptides onto their receptors with full flexibility based on Rosetta RosettaScripts: a scripting language interface to the Rosetta macromolecular modeling suite The Principles of Ligand Specificity on beta-2-adrenergic receptor Exploring functional roles of TRPV1 intracellular domains with unstructured peptide-insertion screening Coupling Protein Side-Chain and Backbone Flexibility Improves the Re-design of Protein-Ligand Specificity A Web Resource for Standardized Benchmark Datasets, Metrics, and Rosetta Protocols for Macromolecular Modeling and Design Combined covalent-electrostatic model of hydrogen bonding improves structure prediction with Rosetta ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules Computational protein design quantifies structural constraints on amino acid covariation Flexible backbone sampling methods to model and design protein alternative conformations Scientific benchmarks for guiding macromolecular energy function improvement Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE)Improvements to robotics-inspired conformational sampling in rosetta Assessment of flexible backbone protein design methods for sequence library prediction in the therapeutic antibody Herceptin-HER2 interface Comparative protein structure modeling using Modeller Shortening a loop can increase protein native state entropy.Pyruvate formate-lyase interacts directly with the formate channel FocA to regulate formate translocation.Atomic-accuracy prediction of protein loop structures through an RNA-inspired Ansatz.Antibody structure determination using a combination of homology modeling, energy-based refinement, and loop prediction.Automated Aufbau of antibody structures from given sequences using Macromoltek's SmrtMolAntibody.Comparative Protein Structure Modeling Using MODELLER Protein loop modeling using a new hybrid energy function and its application to modeling in inaccurate structural environments.Structure prediction for CASP8 with all-atom refinement using Rosetta.PyRosetta: a script-based interface for implementing molecular modeling algorithms using Rosetta Practically useful: what the Rosetta protein modeling suite can do for you Specificity in computational protein design Achievements and Challenges in Computational Protein Design.Cooperative Substrate-Cofactor Interactions and Membrane Localization of the Bacterial Phospholipase A2 (PLA2) Enzyme, ExoU.

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P2860

Sub-angstrom accuracy in protein loop reconstruction by robotics-inspired conformational sampling

http://www.wikidata.org/entity/Q28748259

description

2009 nî lūn-bûn

@nan

2009 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի օգոստոսին հրատարակված գիտական հոդված

@hy

2009年の論文

@ja

2009年論文

@yue

2009年論文

@zh-hant

2009年論文

@zh-hk

2009年論文

@zh-mo

2009年論文

@zh-tw

2009年论文

@wuu

name

Sub-angstrom accuracy in prote ...... spired conformational sampling

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Sub-angstrom accuracy in prote ...... spired conformational sampling

@en

Sub-angstrom accuracy in prote ...... spired conformational sampling

@nl

type

label

Sub-angstrom accuracy in prote ...... spired conformational sampling

@ast

Sub-angstrom accuracy in prote ...... spired conformational sampling

@en

Sub-angstrom accuracy in prote ...... spired conformational sampling

@nl

prefLabel

Sub-angstrom accuracy in prote ...... spired conformational sampling

@ast

Sub-angstrom accuracy in prote ...... spired conformational sampling

@en

Sub-angstrom accuracy in prote ...... spired conformational sampling

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Sub-angstrom accuracy in prote ...... spired conformational sampling

@en

P2093

Daniel J Mandell

http://www.w3.org/2001/XMLSchema#string

P2860

Cyclic coordinate descent: A robotics algorithm for protein loop closure.

Progress in modeling of protein structures and interactions.

Prediction of Protein Loop Conformations using the AGBNP Implicit Solvent Model and Torsion Angle Sampling

Toward better refinement of comparative models: predicting loops in inexact environments.

Protein-protein docking with backbone flexibility.

P2888

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551-2

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scholarly article

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261515

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10.1038/NMETH0809-551

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8

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6

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Evangelos A. Coutsias

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2009-08-01T00:00:00Z

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26707073

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2847683

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