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Cytoscape 2.8: new features for data integration and network visualization

Cytoscape 2.8: new features for data integration and network visualization

http://www.wikidata.org/entity/Q29547471

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A multi-omic systems-based approach reveals metabolic markers of bacterial vaginosis and insight into the disease A taxonomy of bacterial microcompartment loci constructed by a novel scoring method Molecular strategies of the Caenorhabditis elegans dauer larva to survive extreme desiccation TRIP database 2.0: a manually curated information hub for accessing TRP channel interaction network Linked vaccine adverse event data from VAERS for biomedical data analysis and longitudinal studies A multi-level multi-scale approach to study essential genes in Mycobacterium tuberculosis Network-based analysis of comorbidities risk during an infection: SARS and HIV case studies Homozygous loss of DIAPH1 is a novel cause of microcephaly in humans The palmitoyl acyltransferase HIP14 shares a high proportion of interactors with huntingtin: implications for a role in the pathogenesis of Huntington's disease The functional interactome landscape of the human histone deacetylase family Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets Fine-tuning BMP7 signalling in adipogenesis by UBE2O/E2-230K-mediated monoubiquitination of SMAD6 Extended interaction network of procollagen C-proteinase enhancer-1 in the extracellular matrix Regulatory changes contribute to the adaptive enhancement of thermogenic capacity in high-altitude deer mice PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse MOPED: Model Organism Protein Expression Database Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription PathVisio 3: an extendable pathway analysis toolbox Network analysis and juvenile idiopathic arthritis (JIA): a new horizon for the understanding of disease pathogenesis and therapeutic target identification Representing and querying disease networks using graph databases Transcriptome Analysis in Domesticated Species: Challenges and Strategies Application of Functional Genomics for Bovine Respiratory Disease Diagnostics A survey of computational tools for downstream analysis of proteomic and other omic datasets Data integration in biological research: an overview Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future Network-Based Integration of GWAS and Gene Expression Identifies a HOX-Centric Network Associated with Serous Ovarian Cancer Risk The genetics of multiple sclerosis: review of current and emerging candidates An Overview of the Challenges in Designing, Integrating, and Delivering BARD: A Public Chemical-Biology Resource and Query Portal for Multiple Organizations, Locations, and Disciplines Tuning the engine: an introduction to resources on post-transcriptional regulation of gene expression Identification of aberrant pathways and network activities from high-throughput data Visualizing multidimensional cancer genomics data SPASM and twitch domains in S-adenosylmethionine (SAM) radical enzymes Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review Evaluation of database-derived pathway development for enabling biomarker discovery for hepatotoxicity Metabolomics and systems pharmacology: why and how to model the human metabolic network for drug discovery Ion concentration-dependent ion conduction mechanism of a voltage-sensitive potassium channel Dietary protein affects gene expression and prevents lipid accumulation in the liver in mice Analysis of differential gene expression and novel transcript units of ovine muscle transcriptomes

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P2860

Cytoscape 2.8: new features for data integration and network visualization

http://www.wikidata.org/entity/Q29547471

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2011 nî lūn-bûn

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2011 թուականի Փետրուարին հրատարակուած գիտական յօդուած

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2011 թվականի փետրվարին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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Ideker T

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Ono K

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Ruscheinski J

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Smoot ME

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Wang PL

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P2860

Cytoscape: a software environment for integrated models of biomolecular interaction networks

Model of genetic variation in human social networks

Integration of biological networks and gene expression data using Cytoscape

Transcriptional regulation of protein complexes within and across species

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431-2

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120471

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10.1093/BIOINFORMATICS/BTQ675

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21149340

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