about
Different binding properties and function of CXXC zinc finger domains in Dnmt1 and Tet1On the origin of the histone foldDBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongationThe HHpred interactive server for protein homology detection and structure predictionSequence context-specific profiles for homology searchingPhospholipid scramblases and Tubby-like proteins belong to a new superfamily of membrane tethered transcription factorsREPPER--repeats and their periodicities in fibrous proteinsOf Bits and Bugs — On the Use of Bioinformatics and a Bacterial Crystal Structure to Solve a Eukaryotic Repeat-Protein StructureCryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolutionThe Mre11:Rad50 Structure Shows an ATP-Dependent Molecular Clamp in DNA Double-Strand Break RepairFast, scalable generation of high-quality protein multiple sequence alignments using Clustal OmegaUniform transitions of the general RNA polymerase II transcription complex.HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignmentDiscriminative modelling of context-specific amino acid substitution probabilitiesProtein homology detection by HMM-HMM comparisonA vocabulary of ancient peptides at the origin of folded proteinsEvolution of outer membrane beta-barrels from an ancestral beta beta hairpin.HHomp--prediction and classification of outer membrane proteins.Expression, crystallization and preliminary X-ray crystallographic studies of the outer membrane protein OmpW from Escherichia coli.AbrB-like transcription factors assume a swapped hairpin fold that is evolutionarily related to double-psi beta barrels.Context similarity scoring improves protein sequence alignments in the midnight zone.PDBalert: automatic, recurrent remote homology tracking and protein structure prediction.Fast and accurate automatic structure prediction with HHpred.Recruitment of TREX to the transcription machinery by its direct binding to the phospho-CTD of RNA polymerase IITPRpred: a tool for prediction of TPR-, PPR- and SEL1-like repeats from protein sequencesRetroactive, a membrane-anchored extracellular protein related to vertebrate snake neurotoxin-like proteins, is required for cuticle organization in the larva of Drosophila melanogaster.A conserved GA element in TATA-less RNA polymerase II promotersLocalization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome.MMseqs software suite for fast and deep clustering and searching of large protein sequence sets.The MPI bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis.kClust: fast and sensitive clustering of large protein sequence databases.In vivo ligands of MDA5 and RIG-I in measles virus-infected cells.More than the sum of their parts: on the evolution of proteins from peptides.The MOF-containing NSL complex associates globally with housekeeping genes, but activates only a defined subsetAutomatic Prediction of Protein 3D Structures by Probabilistic Multi-template Homology Modeling.Protein sequence comparison and fold recognition: progress and good-practice benchmarking.Bayesian Markov models consistently outperform PWMs at predicting motifs in nucleotide sequences.RECQL5 controls transcript elongation and suppresses genome instability associated with transcription stressModulations of DNA Contacts by Linker Histones and Post-translational Modifications Determine the Mobility and Modifiability of Nucleosomal H3 Tails.Genome-associated RNA polymerase II includes the dissociable Rpb4/7 subcomplex.
P50
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P50
description
hulumtues
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researcher
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wetenschapper
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հետազոտող
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name
Johannes Söding
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Johannes Söding
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Johannes Söding
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Johannes Söding
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Johannes Söding
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Johannes Söding
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type
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Johannes Söding
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Johannes Söding
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Johannes Söding
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Johannes Söding
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Johannes Söding
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Johannes Söding
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prefLabel
Johannes Söding
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Johannes Söding
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Johannes Söding
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Johannes Söding
@fr
Johannes Söding
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Johannes Söding
@sl
P106
P21
P2456
P31
P496
0000-0001-9642-8244
P569
2000-01-01T00:00:00Z