about
SiteEngines: recognition and comparison of binding sites and protein-protein interfacesSitesBase: a database for structure-based protein-ligand binding site comparisonsBinding of protein kinase inhibitors to synapsin I inferred from pair-wise binding site similarity measurementsDrug discovery using chemical systems biology: identification of the protein-ligand binding network to explain the side effects of CETP inhibitorsUsing multiple microenvironments to find similar ligand-binding sites: application to kinase inhibitor bindingA comprehensive survey of small-molecule binding pockets in proteinseMatchSite: sequence order-independent structure alignments of ligand binding pockets in protein modelsRecent advances in functional region prediction by using structural and evolutionary information - Remaining problems and future extensionsComparative analysis of protein structure alignmentsA simple method for finding a protein's ligand-binding pockets.Prediction of enzyme function based on 3D templates of evolutionarily important amino acids.Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments.Prediction of interacting single-stranded RNA bases by protein-binding patternsOn the role of physics and evolution in dictating protein structure and functionBioGPS: navigating biological space to predict polypharmacology, off-targeting, and selectivity.Fast screening of protein surfaces using geometric invariant fingerprints.Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction.SMAP-WS: a parallel web service for structural proteome-wide ligand-binding site comparison.Fingerprint Kernels for Protein Structure Comparison.BioGPS: The Music for the Chemo- and Bioinformatics Walzer.GIRAF: a method for fast search and flexible alignment of ligand binding interfaces in proteins at atomic resolution.Function prediction from networks of local evolutionary similarity in protein structureStructural motifs recurring in different folds recognize the same ligand fragmentsAbstracting knowledge from the Protein Data Bank.Relating destabilizing regions to known functional sites in proteins.Bayesian refinement of protein functional site matching.Spatial chemical conservation of hot spot interactions in protein-protein complexes.Fast dynamics perturbation analysis for prediction of protein functional sites.De-orphaning the structural proteome through reciprocal comparison of evolutionarily important structural featuresStructural descriptor database: a new tool for sequence-based functional site predictionPartial order optimum likelihood (POOL): maximum likelihood prediction of protein active site residues using 3D Structure and sequence propertiesRegression applied to protein binding site prediction and comparison with classificationBSSF: a fingerprint based ultrafast binding site similarity search and function analysis server.A new protein binding pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction.Rapid comparison of protein binding site surfaces with property encoded shape distributionsSuperpose3D: a local structural comparison program that allows for user-defined structure representations.Evolutionary trace annotation of protein function in the structural proteome.A global optimization algorithm for protein surface alignment.The LabelHash algorithm for substructure matching.Fast and automated functional classification with MED-SuMo: an application on purine-binding proteins.
P2860
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P2860
description
2004 nî lūn-bûn
@nan
2004 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2004 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2004年の論文
@ja
2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
name
Recognition of functional sites in protein structures.
@ast
Recognition of functional sites in protein structures.
@en
type
label
Recognition of functional sites in protein structures.
@ast
Recognition of functional sites in protein structures.
@en
prefLabel
Recognition of functional sites in protein structures.
@ast
Recognition of functional sites in protein structures.
@en
P1476
Recognition of functional sites in protein structures.
@en
P2093
Alexandra Shulman-Peleg
Haim J Wolfson
P304
P356
10.1016/J.JMB.2004.04.012
P407
P577
2004-06-01T00:00:00Z