YAHA: fast and flexible long-read alignment with optimal breakpoint detection.
about
LUMPY: a probabilistic framework for structural variant discovery.Structural variation discovery in the cancer genome using next generation sequencing: computational solutions and perspectivesThe Complete Genome Sequences, Unique Mutational Spectra, and Developmental Potency of Adult Neurons Revealed by Cloning.SAMBLASTER: fast duplicate marking and structural variant read extraction.Breakpoint profiling of 64 cancer genomes reveals numerous complex rearrangements spawned by homology-independent mechanisms.Sprites: detection of deletions from sequencing data by re-aligning split reads.Genome-wide detection of DNA double-stranded breaks induced by engineered nucleases.PBHoney: identifying genomic variants via long-read discordance and interrupted mapping.A Long Fragment Aligner called ALFALFA.Detecting DNA double-stranded breaks in mammalian genomes by linear amplification-mediated high-throughput genome-wide translocation sequencingOrientation-specific joining of AID-initiated DNA breaks promotes antibody class switching.Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast.BatAlign: an incremental method for accurate alignment of sequencing readsLocal sequence assembly reveals a high-resolution profile of somatic structural variations in 97 cancer genomes.DNA methylation profiles of diverse Brachypodium distachyon align with underlying genetic diversity.Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation.Diverse, Biologically Relevant, and Targetable Gene Rearrangements in Triple-Negative Breast Cancer and Other Malignancies.LAMSA: fast split read alignment with long approximate matches.BreakSeek: a breakpoint-based algorithm for full spectral range INDEL detection.Sequence analysis of European maize inbred line F2 provides new insights into molecular and chromosomal characteristics of presence/absence variants.A survey of localized sequence rearrangements in human DNA.Heterogeneous rates of genome rearrangement contributed to the disparity of species richness in Ascomycota.Human copy number variants are enriched in regions of low mappability
P2860
Q21999523-D4E66C42-80C3-4EA2-BDB9-BBAC4D79AF33Q26991436-485134DE-D13A-4D7A-BD05-02564E302815Q30277198-D9CE0F90-D85E-41E1-A497-A12B385CFFEAQ30410889-8125924E-0E67-4DF0-B42F-21C0816E7551Q30416550-1BCE3028-5DF9-4511-BADA-4A308E179293Q31041990-78BC01D5-463D-4F8C-B296-5F4573581CD0Q35060760-F0ECCA93-312E-4D21-955A-161CFA4910A4Q35184957-B510F53E-CC70-43FD-9F7E-532675014B96Q35631053-90742B9F-D323-45A0-BAD6-4CA0AB27E8EBQ35975147-B5911C56-38FC-4423-8470-C8EE49CF2AD2Q36116985-63C4407A-BA95-4A7E-A277-A38E4CF92CA8Q36258476-01843C4C-F27C-456F-999F-8116083EA12DQ36299119-DD0DF0C7-6728-4A8A-83FC-E20848F2820DQ36676741-A86F9B90-B301-44A4-8412-E2A62842844AQ37383328-F472CC0D-1EAB-4621-BA83-2CB8B19D266DQ37515750-30EC1FB8-D836-4680-A997-34ED98167BB4Q38768199-29D68718-0FC5-4378-91A2-C9BFA013F4DEQ39352297-50F5930A-6824-4841-B94D-76F15A6C6A6DQ42552455-BA967D31-D7E6-47AC-A667-304C2855957BQ48104068-B86F98AA-F745-4FC8-92C7-76549A9A46C4Q49616753-7F5365B6-D02D-46AB-A4AB-C67D6D0BE3D1Q54955427-A6003482-CE4E-4FEB-8CC1-31CC3C274720Q56894047-456CF05F-C031-4E35-A384-1C5F242FD5E7
P2860
YAHA: fast and flexible long-read alignment with optimal breakpoint detection.
description
2012 nî lūn-bûn
@nan
2012 թուականի Յուլիսին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի հուլիսին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
YAHA: fast and flexible long-read alignment with optimal breakpoint detection.
@ast
YAHA: fast and flexible long-read alignment with optimal breakpoint detection.
@en
type
label
YAHA: fast and flexible long-read alignment with optimal breakpoint detection.
@ast
YAHA: fast and flexible long-read alignment with optimal breakpoint detection.
@en
prefLabel
YAHA: fast and flexible long-read alignment with optimal breakpoint detection.
@ast
YAHA: fast and flexible long-read alignment with optimal breakpoint detection.
@en
P2860
P356
P1433
P1476
YAHA: fast and flexible long-read alignment with optimal breakpoint detection.
@en
P2093
Gregory G Faust
Ira M Hall
P2860
P304
P356
10.1093/BIOINFORMATICS/BTS456
P407
P577
2012-07-24T00:00:00Z