diffReps: detecting differential chromatin modification sites from ChIP-seq data with biological replicates.
about
Chronic cocaine-regulated epigenomic changes in mouse nucleus accumbens.β-catenin mediates stress resilience through Dicer1/microRNA regulationEssential role of poly(ADP-ribosyl)ation in cocaine actionATRX tolerates activity-dependent histone H3 methyl/phos switching to maintain repetitive element silencing in neuronsngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databasesDe novo detection of differentially bound regions for ChIP-seq data using peaks and windows: controlling error rates correctly.Aberrant H3.3 dynamics in NAc promote vulnerability to depressive-like behavior.PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data.csaw: a Bioconductor package for differential binding analysis of ChIP-seq data using sliding windows.Statistical challenges in analyzing methylation and long-range chromosomal interaction dataThe quest for epigenetic regulation underlying unisexual flower development in Cucumis melo.Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features.Locus-specific epigenetic remodeling controls addiction- and depression-related behaviors.Analytical tools and current challenges in the modern era of neuroepigenomicsSIRT1-FOXO3a regulate cocaine actions in the nucleus accumbens.histoneHMM: Differential analysis of histone modifications with broad genomic footprints.Lipid-induced epigenomic changes in human macrophages identify a coronary artery disease-associated variant that regulates PPAP2B Expression through Altered C/EBP-beta binding.Targeting chromatin binding regulation of constitutively active AR variants to overcome prostate cancer resistance to endocrine-based therapiesAn integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum.Genome-wide errant targeting by Hairy.LHP1 Regulates H3K27me3 Spreading and Shapes the Three-Dimensional Conformation of the Arabidopsis Genome.EpiMINE, a computational program for mining epigenomic data.Identification of Binding Targets of a Pyrrole-Imidazole Polyamide KR12 in the LS180 Colorectal Cancer GenomeRole of Tet1 and 5-hydroxymethylcytosine in cocaine action.An Alternative Approach to ChIP-Seq Normalization Enables Detection of Genome-Wide Changes in Histone H3 Lysine 27 Trimethylation upon EZH2 Inhibition.The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition.The estrous cycle surpasses sex differences in regulating the transcriptome in the rat medial prefrontal cortex and reveals an underlying role of early growth response 1Bioinformatic Analysis for Profiling Drug-induced Chromatin Modification Landscapes in Mouse Brain Using ChlP-seq Data.Dynamics of DNA methylomes underlie oyster developmentReprogramming progeria fibroblasts re-establishes a normal epigenetic landscape.Local compartment changes and regulatory landscape alterations in histone H1-depleted cellsHepatic Long Intergenic Noncoding RNAs: High Promoter Conservation and Dynamic, Sex-Dependent Transcriptional Regulation by Growth Hormone.MethylAction: detecting differentially methylated regions that distinguish biological subtypes.Genome-Wide Epigenetic Studies in Human Disease: A Primer on -Omic TechnologiesBAZ1B in Nucleus Accumbens Regulates Reward-Related Behaviors in Response to Distinct Emotional Stimuli.Hypoxia causes transgenerational impairments in reproduction of fishHistone arginine methylation in cocaine action in the nucleus accumbens.Essential role of SIRT1 signaling in the nucleus accumbens in cocaine and morphine action.Genomic and epigenomic analysis of high-risk prostate cancer reveals changes in hydroxymethylation and TET1.The linker histone H1.0 generates epigenetic and functional intratumor heterogeneity.
P2860
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P2860
diffReps: detecting differential chromatin modification sites from ChIP-seq data with biological replicates.
description
2013 nî lūn-bûn
@nan
2013 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年学术文章
@wuu
2013年学术文章
@zh-cn
2013年学术文章
@zh-hans
2013年学术文章
@zh-my
2013年学术文章
@zh-sg
2013年學術文章
@yue
name
diffReps: detecting differenti ...... ta with biological replicates.
@ast
diffReps: detecting differenti ...... ta with biological replicates.
@en
type
label
diffReps: detecting differenti ...... ta with biological replicates.
@ast
diffReps: detecting differenti ...... ta with biological replicates.
@en
prefLabel
diffReps: detecting differenti ...... ta with biological replicates.
@ast
diffReps: detecting differenti ...... ta with biological replicates.
@en
P2093
P2860
P50
P1433
P1476
diffReps: detecting differenti ...... ta with biological replicates.
@en
P2093
P2860
P304
P356
10.1371/JOURNAL.PONE.0065598
P407
P577
2013-06-10T00:00:00Z